Pairwise Alignments

Query, 279 a.a., ABC transporter for N-Acetyl-D-glucosamine, permease protein 2 (from data) from Sinorhizobium meliloti 1021

Subject, 288 a.a., carbohydrate ABC transporter permease from Bifidobacterium breve UCC2003

 Score =  125 bits (314), Expect = 1e-33
 Identities = 77/265 (29%), Positives = 136/265 (51%), Gaps = 6/265 (2%)

Query: 16  AALIAYTLIALFPVFLTIVNSFKSRNAIFREPLAVPTPETFSLIGYETVLKQGDFIGYFQ 75
           AA+   +L  L P++ TIV + K+      E      P ++    +     + ++     
Sbjct: 29  AAVAVLSLTILIPLYFTIVTALKTP----AEAGTFALPTSWQWHNFADASAKVNYPKAAL 84

Query: 76  NSIIVTVVSIALVLLFGAMAAFALSEYRFRGNTLMGLYLALGIM-IPIRLGTVAILQGMV 134
           NS I+TV ++ L LL     A+A++    +       Y  +  M +P  +  + I + M 
Sbjct: 85  NSAIITVAAVVLTLLTNTFVAYAVARNMDKRFFRFLYYFFIAAMFVPFPVIMLPIAKQMG 144

Query: 135 ATGLVNTLTALILVYTAQGLPLAVFILSEFMRTVSDDLKNAGRIDGLSEYAIFLRLVLPL 194
           +  L N +  LI++YT  GL   +FI + F+R++   L+ A RIDG S + IF  ++ PL
Sbjct: 145 SLHLDNQV-GLIILYTVLGLGTNLFIATGFIRSIPVSLEEAARIDGASTWRIFWTIIFPL 203

Query: 195 IRPAMATVAVFTMIPIWNDLWFPLILAPAEATKTVTLGSQIFIGQFVTNWNAVLSALSLA 254
           + P  AT+A+ T +  WND   PLI+   ++ +T+ L   +F  QF TN+    S+  +A
Sbjct: 204 MSPINATIAILTALWAWNDFLLPLIILTDQSNQTIPLAQYVFSSQFATNYPMAFSSYLMA 263

Query: 255 IFPVLVLYVIFSRQLIRGITAGAVK 279
           + P+L++Y+   + ++ G+  GAVK
Sbjct: 264 MAPILIVYIFAQKWVVGGVMRGAVK 288