Pairwise Alignments

Query, 374 a.a., recombination protein F from Sinorhizobium meliloti 1021

Subject, 357 a.a., DNA recombination and repair protein RecF from Pseudomonas fluorescens FW300-N2E2

 Score = 96.7 bits (239), Expect = 9e-25
 Identities = 90/342 (26%), Positives = 147/342 (42%), Gaps = 18/342 (5%)

Query: 16  RNYATLALDLDQRHVVLTGENGAGKTNLMEGVSFLSPGRGLRRAAYADVARVGAPDGFSV 75
           RN   +      R  +L G NG+GKT+++E V  L   R  R      V +       +V
Sbjct: 2   RNLHPVTFSPSPRINILYGANGSGKTSVLEAVHLLGLARSFRSTRLLPVIQYDQL-ACTV 60

Query: 76  FAAVDGMEGSVEIGTGTQGTEEGQSRRLRINGTAARTVDELTDHLRVLWLTPAMDGLFTG 135
           F  V+  EG      G     +G+ + +RI+G  AR+  +L + L +  + P    L  G
Sbjct: 61  FGQVELAEGG-HSALGISRDRQGEFQ-IRIDGQNARSAAQLAEILPLQLINPDSFRLLEG 118

Query: 136 PSADRRRFLDRLVLSLDPEHGRRASEFDRAMRSRNRLLSEFRPDPAWLSAIEREMAGLGI 195
               RR+FLD  V  ++P          +A+R RN  L     D    +  +RE+     
Sbjct: 119 APKIRRQFLDWGVFHVEPRFMATWQRLQKALRQRNSWLRHGTLDAVSQAVWDRELCQASA 178

Query: 196 SMALARQEMLGLLSALVERSRSDGTFPSASLSLAGFLDDCAGIPAFELEERYLAMLAEGR 255
            +   R+  +  L  + E++ S+       L+L+ +         ++ +     +LA   
Sbjct: 179 EIDEYRRAYIKALKPVFEQTLSE-LVELEGLTLSYY-------RGWDKDRELSTVLAGSL 230

Query: 256 ARDAAAGRTLDGPHRSDLLIR---HREKDIEAERCSTGEQKALLVGLVLAHARLVGDMTG 312
            RD   G T  GP R+DL +R   H   DI     S G+QK ++  L +A   LV     
Sbjct: 231 QRDQQMGHTQAGPQRADLRLRLGAHNAADI----LSRGQQKLVVCALRIAQGHLVSQARR 286

Query: 313 HAPVLLLDEIAAHLDQGRRAALFDLVDGLGGQSFMTGTDRAM 354
              + L+D++ + LD+  R AL  L++ L  Q F+T  D  +
Sbjct: 287 GQCIYLVDDLPSELDEAHRRALCRLLEDLRCQVFITCVDHEL 328