Pairwise Alignments

Query, 269 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 792 a.a., TPR/GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 46.2 bits (108), Expect = 2e-09
 Identities = 30/81 (37%), Positives = 36/81 (44%)

Query: 152 GAILDQLGRSAEARLRYREALDLKPNEPSVLSNLGMSYLLTKDLRTAETYLKSAASQPDA 211
           G +   LG +AEAR +YR+ L   P     L  LG      K    A  Y   AA   D+
Sbjct: 633 GTVCQSLGETAEARKQYRKCLKYAPGHVFALVRLGQLAEGEKRYAQARQYFNKAARAGDS 692

Query: 212 GSSVRQNLALAVGLQGRFQEA 232
           G  V +NLA     QGR  EA
Sbjct: 693 GGLVHRNLARLSMRQGRPDEA 713



 Score = 33.1 bits (74), Expect = 2e-05
 Identities = 34/116 (29%), Positives = 48/116 (41%), Gaps = 8/116 (6%)

Query: 58  ELAAAAERIGQAYERNPKDREAG----LNYANLLRMT---GRNEQALAVMQQVAIYHPAD 110
           +LA   +R  QA +   K   AG    L + NL R++   GR ++A   +    + +P D
Sbjct: 668 QLAEGEKRYAQARQYFNKAARAGDSGGLVHRNLARLSMRQGRPDEAREHLHDALLRNPQD 727

Query: 111 REVLGAYGKAQAAAGQLEQALATISRAQTPDRPDWKLKSAEGA-ILDQLGRSAEAR 165
              L    +     G+       +SR     RPD K    E A  LD  G  AEAR
Sbjct: 728 AVALQLMARLYLDGGEDPAMAEALSRQSVALRPDLKQGWLELARALDARGHVAEAR 783



 Score = 28.9 bits (63), Expect = 4e-04
 Identities = 40/167 (23%), Positives = 62/167 (37%), Gaps = 3/167 (1%)

Query: 68  QAYERNPKDREAGLNYANLLRMTGRNEQALAVMQQVAIYHPADREVLGAYGKAQAAAGQL 127
           QA +R P D  A  N   + +  G   +A    ++   Y P     L   G+      + 
Sbjct: 617 QALQRKPGDPMALYNLGTVCQSLGETAEARKQYRKCLKYAPGHVFALVRLGQLAEGEKRY 676

Query: 128 EQALATISRAQTPDRPDWKLKSAEGAILDQLGRSAEARLRYREALDLKPNEPSVLSNLGM 187
            QA    ++A         +      +  + GR  EAR    +AL   P +   L  +  
Sbjct: 677 AQARQYFNKAARAGDSGGLVHRNLARLSMRQGRPDEAREHLHDALLRNPQDAVALQLMAR 736

Query: 188 SYL-LTKDLRTAETYLK-SAASQPDAGSSVRQNLALAVGLQGRFQEA 232
            YL   +D   AE   + S A +PD      + LA A+  +G   EA
Sbjct: 737 LYLDGGEDPAMAEALSRQSVALRPDLKQGWLE-LARALDARGHVAEA 782