Pairwise Alignments

Query, 826 a.a., sensor histidine kinase from Sinorhizobium meliloti 1021

Subject, 1239 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

 Score =  131 bits (330), Expect = 2e-34
 Identities = 84/281 (29%), Positives = 145/281 (51%), Gaps = 14/281 (4%)

Query: 551 TGLILDYAVIPLPNAQTMLT---FVNITDSVRVERALTEKNEALRKADALKNDFVHHVSY 607
           + L ++  + PL +    L     ++I+     ER L E+ + L  A+  K++F+ ++S+
Sbjct: 554 SALPVEIGLSPLRSGDEQLVQAVIIDISHRKAAERRLREQADQLAVANRYKSEFLANMSH 613

Query: 608 ELRSPLTNIIGFADLLKTPVFGELNERQAEYVDHIATSSSLLLTIVNDILDLATVDAGIV 667
           ELR+PL +I+  +D L+    G LNE+Q  + D I  +   LL ++ND+LDLA +++G +
Sbjct: 614 ELRTPLNSILILSDQLRQNGAGNLNEKQVRHADIIHRAGHELLQLINDVLDLAKIESGHM 673

Query: 668 ELELSEVNLIDLIDDVTQQMGDRLVESGVSLRTDAPDNLG-RITADQQRLKQIFIKLLTN 726
           +L+L  +NL +++ +    +G    + G+ L+ +   ++   + +D+ RL+QI   LLTN
Sbjct: 674 QLKLEPLNLREMLTEQQTSLGPMAEQKGLLLKIEVDADVPVTLNSDRARLQQILRNLLTN 733

Query: 727 AANFAPDGSTIELKCWREGSD-----FAFSVTDTGPGIPQDVLNTVFNRFESYG-----Q 776
           A  F   G    L   R   D         V D+G GI +D    +F  F+         
Sbjct: 734 ALKFTEQGEVELLASCRSAEDGSGQTLQLQVRDSGIGIAKDQHERIFQAFQQIDGSISRH 793

Query: 777 RGGAGLGLSIVESFVSLHHGNVSIRSKEGEGTAVTCRIPSA 817
            GG GLGL+I    V +  G V++ S+ G+G   T  +P A
Sbjct: 794 YGGTGLGLAITRQLVEVLGGQVTVESELGQGATFTVVLPIA 834