Pairwise Alignments

Query, 826 a.a., sensor histidine kinase from Sinorhizobium meliloti 1021

Subject, 778 a.a., PAS/PAC Sensor Signal Transduction Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

 Score =  133 bits (335), Expect = 3e-35
 Identities = 86/252 (34%), Positives = 137/252 (54%), Gaps = 8/252 (3%)

Query: 573 NITDSVRVERALTEKNEALRKADALKNDFVHHVSYELRSPLTNIIGFADLLKTPVFGELN 632
           +ITDS R E  L E  EA   A+  K++F+ ++S+ELR+PL  IIGF+++L + +FG L 
Sbjct: 522 DITDSRRGEDRLREAKEAAEFANRAKSEFLTNMSHELRTPLNAIIGFSEVLHSEMFGPLG 581

Query: 633 ERQ-AEYVDHIATSSSLLLTIVNDILDLATVDAGIVELELSEVNLIDLIDDVTQQMGDRL 691
             Q  +Y   I  S   LL ++NDILD++ ++AG   L    ++  +++  V + +  R 
Sbjct: 582 ATQYLDYAASIRDSGRHLLDVINDILDVSRIEAGRATLFPEPLDFAEIVASVHRLVNQRA 641

Query: 692 VESGVSLRTDAPDNLGRITADQQRLKQIFIKLLTNAANFAPDGSTIELKCW--REGSDFA 749
             +GV L+      L  +  + +RLKQ+ I LL NA  F P G  I L      +     
Sbjct: 642 EAAGVRLKITLDPALPPLLGEARRLKQVLINLLGNAIKFTPAGGEIALSARGDEDKGQMV 701

Query: 750 FSVTDTGPGI-PQDVLNTV--FNRFESYGQR--GGAGLGLSIVESFVSLHHGNVSIRSKE 804
             V+D+G G+ P+D+   +  F + +    R   G GLGL + ++FV LH G + + S  
Sbjct: 702 IEVSDSGIGMAPEDIPLALEPFRQIDGQLARRYEGTGLGLPLSKAFVELHGGTLRVDSTP 761

Query: 805 GEGTAVTCRIPS 816
           G GT +T R+P+
Sbjct: 762 GAGTRITVRLPA 773



 Score = 31.6 bits (70), Expect = 2e-04
 Identities = 15/40 (37%), Positives = 22/40 (55%)

Query: 467 ETIDHLAEGVAVFGPDGRIRLSNPAFRAIWGISETEAQPG 506
           +  DHL EGVA++GPD R+   N  F ++   +     PG
Sbjct: 15  DIFDHLDEGVALYGPDHRLIRFNRPFASLVETAGGRPAPG 54



 Score = 30.8 bits (68), Expect = 3e-04
 Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 2/84 (2%)

Query: 421 WHLPNGQT--LRVFATARPQGGATWVFENLTERVDLETRYNTLVQVQGETIDHLAEGVAV 478
           W   NG+   +RV  +  P+GG   +  ++TE      +     Q     +  + +G+ V
Sbjct: 237 WDFENGRGRWVRVSESLTPEGGRVGLLTDITETRKASEQVRQREQRLDGIMKTVVDGIVV 296

Query: 479 FGPDGRIRLSNPAFRAIWGISETE 502
              +G I   NPA   ++G    E
Sbjct: 297 IDENGIIESFNPAAERLFGYRAEE 320