Pairwise Alignments

Query, 440 a.a., toxin secretion transmembrane protein from Sinorhizobium meliloti 1021

Subject, 481 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

 Score =  166 bits (420), Expect = 1e-45
 Identities = 113/435 (25%), Positives = 210/435 (48%), Gaps = 10/435 (2%)

Query: 13  TVRLTTWVLISGLVAIFVGGYWLKIEIVARGQGKVIPVSRVQLVQPQTNGRIIRILVTEG 72
           + R+  WV+++  +       W +I+ V  GQGKV+P S+VQ++Q    G + +ILV EG
Sbjct: 49  SARIILWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNLEGGLVKQILVREG 108

Query: 73  QPVKAGDLLVGMDTVSVESQIKLRLTEVRRQ-----RRGATVARVIIAA-LTNVAVANDD 126
           + V+ G  L+ +D     S  + R  +V        +  A+++ VII         AN  
Sbjct: 109 EQVQKGQQLILLDDTRFRSDFREREQQVANLTASVLQLSASISSVIIDENFEEKNWANSV 168

Query: 127 VLAAGRAAFERERHDLE--VIDGAEALIEAVLTSLRDQVARINAQLDRVEQSRITQQARL 184
            L   + AF     D +  +++         L +LR+Q++ ++ Q+ + +Q  I  +AR+
Sbjct: 169 QLDYSKLAFPPVLSDSQPDLVERQRDQYRQDLDNLRNQLSVLSQQIKQKQQDLIEAEARI 228

Query: 185 QKARSDLDISSRKFLSAGKLKDKGAISEVDYFERLREQRARELEVLISESELNILAAEAN 244
              R   D + ++      L ++G + +++  +  R+      E+  +E ++ +L +   
Sbjct: 229 INLRQSYDYAKKELDITEPLANEGVVPKIELLKLQRQLNDTRRELTSTELKIPVLKSAVR 288

Query: 245 ALARQRQSIISTAVENYQKQLNEASTSLAGLEAELSAARNQLALLAIRAPADGKVENLTV 304
                R +         Q +LN+A   L+ L        +++    + +P  G V+ L V
Sbjct: 289 EAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVNRTVVVSPVTGTVKTLYV 348

Query: 305 FTIGGFVEAGSTLMSIVPSGDGMEIEAFFDNRDIGFLAKGQEAFVKFDAFPAERFGIVRG 364
            T+GG ++ G  ++ IVP+ D + +EA    +DI FL     A VKF A+   R+G + G
Sbjct: 349 NTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIVFLRPDLPAIVKFSAYDFTRYGGLEG 408

Query: 365 RVTRVGADARGDIVPGKWVYAIHLVLDQETIGIGGRDIGFSPGMTATIDVITGERRLISY 424
            +  + AD   D   G   Y + +   + T+G   +++   PGMTA++D+ITG+R ++ Y
Sbjct: 409 TLEHISADTTQD-EEGNSFYLVRVRTKETTLG-HDQNLPIIPGMTASVDIITGKRTVLDY 466

Query: 425 FFEPIIKAIQDGLGE 439
             +PI+ A  + L E
Sbjct: 467 LLKPILSAQSNALRE 481