Pairwise Alignments

Query, 301 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 300 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Xanthomonas campestris pv. campestris strain 8004

 Score =  108 bits (270), Expect = 2e-28
 Identities = 75/288 (26%), Positives = 145/288 (50%), Gaps = 8/288 (2%)

Query: 5   RLALELLLLVALATLWGASYTFIKIGVET-IPPVTLIA-ARTLIAGTVLLALIAWRGLTL 62
           R  L +L L+ +  +WG++Y  I+  +     P+T+++ AR ++AGT+L A++ WRG+  
Sbjct: 14  RNGLVVLALLLVYVVWGSTYLVIRFALAGGAQPLTMVSGARFIVAGTLLYAVLRWRGVAA 73

Query: 63  PRDGAMWRRFLFQACLNSVVPFTLIAWSERTTDAGVAAILNSTTPIFAFLLTALITRHEP 122
           P   A W+   F      ++   ++  +ER+  +G+AA   ++ P++  L  AL  +H  
Sbjct: 74  PTP-AQWKNVAFMGAALLLLGNGMVVLAERSVSSGLAATAVASVPLWMALFGALRGQH-- 130

Query: 123 VTARKFLGVLAGIAGIGLIIGLEAFRGIGDQLIPQLAVVLATVCYAGAAIFGKGFRGLDP 182
            +  ++LG++ G  G+   + L A   +       + +++A + +A  +++ +G     P
Sbjct: 131 ASRGEWLGIVIGFLGV---VWLNAGSSLTATPGGLVLLLIAPIGWAFGSVWSRGRDLPTP 187

Query: 183 MMPACGSLLAGAALLIPASLVVDRPWTLDPSPESLIALLCLSVFSTALAFVIYFRLIHTL 242
            M A G +L G  LL+   L++       P+ + L+A+  L VF + +AF  Y  L+H +
Sbjct: 188 FMTAAGQMLCGGVLLVSTGLLLGERPHAWPTTQGLLAVAYLCVFGSIVAFTAYVWLLHHV 247

Query: 243 GSVGATAQAYVRVPIGVAIGVVFLGETLSTTAWLGLGCVIAGVAAMTM 290
               A + AYV   I V++G     E  S      +  ++ GV  +T+
Sbjct: 248 RPALAGSYAYVNPVIAVSLGAWLGHERFSAHDIGAMAVILCGVLVVTL 295