Pairwise Alignments

Query, 509 a.a., F0F1 ATP synthase subunit alpha from Sinorhizobium meliloti 1021

Subject, 513 a.a., F0F1 ATP synthase subunit alpha (RefSeq) from Shewanella loihica PV-4

 Score =  562 bits (1448), Expect = e-164
 Identities = 293/518 (56%), Positives = 378/518 (72%), Gaps = 19/518 (3%)

Query: 1   MDIRAAEISAILKDQIKNFGQEAEVSEVGQVLSVGDGIARVYGLDNVQAGEMVEFPGGIR 60
           M + + EIS ++K +I+ F   +E    G +++V DGI RV+GL +V  GEM+E PG   
Sbjct: 1   MQLNSTEISDLIKQRIEQFEVVSEARNEGTIVAVSDGIIRVHGLADVMQGEMIELPGNRY 60

Query: 61  GMALNLEADNVGVVIFGSDRDIKEGDTVKRTGAIVDVPVGPELLGRVVDALGNPIDGKGP 120
            +ALNLE D+VG V+ G   D+ EG  VK TG I++VPVG  LLGRVV+ LG PIDGKGP
Sbjct: 61  AIALNLERDSVGAVVMGPYADLAEGQKVKTTGRILEVPVGRGLLGRVVNTLGQPIDGKGP 120

Query: 121 INAKQRARVDVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGKTAIIL 180
           I+    + V+V APG+I RKSV +P+ TG KA+D++IP+GRGQRELVIGDRQTGKTA+ +
Sbjct: 121 IDNDGFSPVEVIAPGVIERKSVDQPVQTGYKAVDSMIPIGRGQRELVIGDRQTGKTALAI 180

Query: 181 DTILNQKAIHDNGPEGDKLYCVYVAIGQKRSTVAQFVKVLEERGALQYSIIVAATASDPA 240
           D I+NQK   D+G     + CVYVA+GQK ST+A  V+ LEE GAL  +++V ATAS+ A
Sbjct: 181 DAIINQK---DSG-----IKCVYVAVGQKASTIANVVRKLEEHGALANTVVVVATASEAA 232

Query: 241 PMQYLAPFAGCAMGEYFRDNGKHALIGYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFY 300
            +QYLAP++GC+MGEYFRD G+ ALI YDDLSKQAVAYRQ+SLLL+RPPGREAYPGDVFY
Sbjct: 233 ALQYLAPYSGCSMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFY 292

Query: 301 LHSRLLERAAKLSDE----------RG-AGSLTALPVIETQGNDVSAFIPTNVISITDGQ 349
           LHSRLLERA++++ E          +G  GSLTALP+IETQ  DVSAF+PTNVISITDGQ
Sbjct: 293 LHSRLLERASRVNAEYVEKFTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQ 352

Query: 350 IFLETDLFYQGIRPAVNVGLSVSRVGSSAQIKAMKQVAGSIKGELAQYREMAAFAQFGSD 409
           IFLETDLF  G+RPAVN G+SVSRVG +AQ K +K+++G I+  LAQYRE+AAF+QF SD
Sbjct: 353 IFLETDLFNSGLRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRELAAFSQFASD 412

Query: 410 LDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGVNGYLDKLPVSDVGKFEHGLL 469
           LD AT+  L  G R+TEL+KQ Q++P+   +Q   IFA   GYL  + ++ +G FE  LL
Sbjct: 413 LDDATRAQLEHGERVTELMKQKQYAPMSVADQSVSIFAAEKGYLKGVELNKIGDFEASLL 472

Query: 470 SYLRSEGKAVLDTIRTEKAISDDTKAKLKGAIDSFAKS 507
           SY+ SE   ++ TI      + D +  LK  +D F ++
Sbjct: 473 SYMNSEHADLMKTINETGDYNADIEGGLKAGLDKFVET 510