Pairwise Alignments

Query, 330 a.a., site-specific tyrosine recombinase XerC from Sinorhizobium meliloti 1021

Subject, 303 a.a., tyrosine recombinase XerC from Pseudomonas aeruginosa PA14

 Score =  179 bits (453), Expect = 1e-49
 Identities = 116/300 (38%), Positives = 162/300 (54%), Gaps = 13/300 (4%)

Query: 33  AERRRWLASLAEERRLSEKTVDAYERDTRQFLTFLTGHLAGPPRLSDICALRPADLRGFL 92
           A+   +L  L  ER++S  T+D Y RD  + L      LA    LSD  AL    LR F+
Sbjct: 3   ADLDAFLEHLRSERQVSAHTLDGYRRDLLKILA-----LAEKAGLSDWNALDTRSLRTFV 57

Query: 93  AQRRKGGAGARTLGRGLAGLRSFLRYLERNGLANAAGAGAVRSPKQPKSLPKALTDREAL 152
           A+  + G  +R+L R L+  R   +YL R G      A  + +PK P+ LP+ L    AL
Sbjct: 58  ARLHQQGQSSRSLARLLSATRGLYQYLLREGRCRHDPANGLSAPKSPRKLPRTLDADRAL 117

Query: 153 KVVTADAQLAEEPWIAARNAAVLTLLYGCGLRIAE--ALDLTPADFSGPVTSLRVTGKGG 210
           +++       E+ +IA R+ A+L L Y  GLR++E   LDL   D    +  +RV GKG 
Sbjct: 118 QLLDG---AVEDDFIARRDQALLELFYSSGLRLSELVGLDLEWLDLKEGL--VRVRGKGN 172

Query: 211 KTRIVPMIAAAAEAVETYRKLCPYHIEPEEPIFRGARGAKLQPAIIQREMQKLRAALGLP 270
           K R +P+  AA +A+E +  L       +  +F G  G +L P  IQ  +++      L 
Sbjct: 173 KVRELPVGKAARQALEAWLPLRAQAAPEDGAVFIGRGGKRLTPRAIQLRVRQA-GVRELG 231

Query: 271 DSATPHALRHSFATHLLAGGGDLRTIQELLGHASLSTTQVYTGVDSARLLEIYDRAHPRA 330
               PH LRHSFA+HLL   GDLR +QELLGHA ++TTQ+YT +D   L  +YDRAHPRA
Sbjct: 232 QHLHPHMLRHSFASHLLESSGDLRAVQELLGHADIATTQIYTHLDFQHLASVYDRAHPRA 291