Pairwise Alignments

Query, 868 a.a., ATP-dependent protease from Sinorhizobium meliloti 1021

Subject, 861 a.a., ClpB protein from Xanthomonas campestris pv. campestris strain 8004

 Score =  985 bits (2546), Expect = 0.0
 Identities = 509/863 (58%), Positives = 647/863 (74%), Gaps = 5/863 (0%)

Query: 1   MDIEKYSERVRGFLQSAQTYALAEGHQQFTPEHVLKVLLDDDQGMAASLIERAGGNAREA 60
           M ++K + R +  L  AQ+ A+   H    P HVL  LLD   G    L+ ++G N    
Sbjct: 1   MRMDKLTSRFQQALADAQSLAVGRDHNIIEPVHVLAALLDQSGGSTRPLLSQSGVNVPAL 60

Query: 61  KVGTAAALAKLPKVTGGNGSVYLSQPLAKVFTAAEDAAKKAGDSFVTVERLLLALAIESS 120
           +     AL  LPKV+G  G++ +   L ++    +  A++ GD+F+  E  +LA A ++S
Sbjct: 61  RERLGEALDTLPKVSGQEGNLSIGNDLNRLLNQTDKLAQQHGDAFIASEWFVLAAADDAS 120

Query: 121 AATASILSKAGVTPTKLNQVINEIRKGRTADSANAEQGFDSLKKYARDLTAEAREGKLDP 180
               + L  AG    K+   I+++R G T  S NAE+   +L+KY  DLTA A  GKLDP
Sbjct: 121 PLGVA-LRAAGGDKKKIEAAIDKLRGGETVQSENAEEQRQALEKYTIDLTARAESGKLDP 179

Query: 181 VIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDKRLMA 240
           VIGRD+EIRRTIQVL RRTKNNPVLIGEPGVGKTAI EGLA RI+NG+VPE L+ KR+++
Sbjct: 180 VIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLS 239

Query: 241 LDMGALIAGAKFRGEFEERLKAVLNEVRSEGGEIILFIDEMHTLVGAGKADGAMDASNLL 300
           LDMGALIAGAKFRGEFEERLKAVL+++    G+IILFIDE+HT+VGAGKADGAMDA N+L
Sbjct: 240 LDMGALIAGAKFRGEFEERLKAVLSDLSKNEGQIILFIDELHTMVGAGKADGAMDAGNML 299

Query: 301 KPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVMVEEPTVEDTISILRGLKEKYEQ 360
           KPALARGELHC+GATTLDEYRK++EKDAAL RRFQ V V EPTVEDTI+ILRGLKE+Y  
Sbjct: 300 KPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYAV 359

Query: 361 HHKVRISDSALVAAAALSNRYITDRFLPDKAIDLMDEAASRLRMQVDSKPEELDELDRRV 420
           HH V I+D A+VAAA LSNRYITDR LPDKAIDLMDEAASR+RM++DSKPEELD L+RR+
Sbjct: 360 HHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRL 419

Query: 421 IQLKIEREALKKETDVSSKDRLAKLELDLSSLEEEAAALTARWQAEKQKLGQAADLKKQL 480
           IQLKI+RE LKKE D +S+ RLA LE D+  LE E + L   W++EK  L     +K+Q+
Sbjct: 420 IQLKIQREMLKKEKDEASRQRLADLESDIDKLEREFSDLNEVWKSEKAALQGTTKIKEQI 479

Query: 481 DEARNELQIAQRKGEFQRAGELAYGVIPNLEKELAEAESQDGASANPMVQEVVTPDNIAH 540
           + A+ EL+ AQR+ ++ +  E+ YGV+P LEK++  A   +      +VQ+ VT + IA 
Sbjct: 480 EHAKLELEAAQRRQDYAKMSEIQYGVLPQLEKQMLLANEVEHHDFK-LVQDRVTAEEIAE 538

Query: 541 IVSRWTGIPVDKMLEGERDKLLRMEDELAKWVVGQGDAVQAVSRAVRRSRAGLQDPNRPI 600
           +VSRWTGIPV+KMLEGERDKLLRMEDEL + VVGQ +A++ VS AVRRSRAGL DPNRP 
Sbjct: 539 VVSRWTGIPVNKMLEGERDKLLRMEDELHRRVVGQEEAIKVVSDAVRRSRAGLSDPNRPS 598

Query: 601 GSFIFLGPTGVGKTELTKALARFLFDDETALMRIDMSEYMEKHSVARLIGAPPGYVGYEE 660
           GSF+FLGPTGVGKTEL KALA FLFD   A++RIDMSE+MEKHSV+RLIGAPPGYVGYEE
Sbjct: 599 GSFLFLGPTGVGKTELCKALADFLFDSTEAMIRIDMSEFMEKHSVSRLIGAPPGYVGYEE 658

Query: 661 GGALTESVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTMIIMTS 720
           GG LTE+VRRRPY ++L DE+EKAH DVFN+LLQVLDDGRLTDGQGRTVDF+NT+I+MTS
Sbjct: 659 GGYLTEAVRRRPYSLILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTS 718

Query: 721 NLGAEYLTALGENEDSDA---VRDQVMEVVRAAFRPEFLNRVDEIILFHRLRRSEMGAIV 777
           NLG+  +  L  +  ++A   ++  VM VV+A FRPEF+NR+D+I++FH L ++++ +I 
Sbjct: 719 NLGSHQIQELSGDGSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIA 778

Query: 778 DIQLERLRKLLSDRKITLELEDDARVFLADRGYDPAYGARPLKRAIQKYVQDPLAEKVLQ 837
            IQL+ L K L++R + L+L+D A   L + G+DP YGARPLKRAIQ  V++PLA+++L 
Sbjct: 779 RIQLQGLEKRLAERGLKLDLDDPALELLGNVGFDPVYGARPLKRAIQSQVENPLAQQILS 838

Query: 838 GEFPDGSVIKVVAGSDRLNFKRG 860
           G++  G  ++V      L F +G
Sbjct: 839 GQYTSGDTVRVRTEGGHLAFTKG 861