Pairwise Alignments

Query, 503 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 517 a.a., D-ribose transporter ATP-binding protein from Pseudomonas fluorescens FW300-N2C3

 Score =  422 bits (1086), Expect = e-122
 Identities = 212/485 (43%), Positives = 323/485 (66%)

Query: 10  ISKSFPGVRALSDVSLALYPGSVTALVGENGAGKSTLVKILTGIYQPDAGTIRLGDTETT 69
           +SK FPGV ALSDV L + PGSV AL+GENGAGKSTL+KI+ GIYQPDAG +RL     T
Sbjct: 32  VSKGFPGVVALSDVQLRVRPGSVLALMGENGAGKSTLMKIIAGIYQPDAGELRLRGKPVT 91

Query: 70  FPTALAASRAGVTAIHQETVLFDELSVAENIFLGHAPRNRFGLIDWKQLNADAQALLGRA 129
           F T LAA +AG+  IHQE  L   +S+AENI++G    N   ++D  +++     LL R 
Sbjct: 92  FDTPLAALQAGIAMIHQELNLMPHMSIAENIWIGREQLNGLHMVDHGEMHRCTARLLERL 151

Query: 130 GADFDPTIRLRDLGIAKKHLVAIARALSVDARVVIMDEPTAALSHKEIHELYDLIERLKA 189
               DP  ++ +L IA++ +V IA+A+S D+ ++IMDEPT+A++  E+  L+ +I  LK+
Sbjct: 152 RIKLDPEEQVGNLSIAERQMVEIAKAVSYDSDILIMDEPTSAITETEVAHLFSIIADLKS 211

Query: 190 DGKAVLFISHKFDEIFRIADRYTVFRDGAMIGEGLIADVSQDDLVRMMVGRAVGSVYPKK 249
            GK +++I+HK +E+F IAD   VFRDGA IG      +  D L+ MMVGR +  ++P +
Sbjct: 212 QGKGIIYITHKMNEVFAIADEVAVFRDGAYIGLQRADSMDGDSLISMMVGRELSQLFPVR 271

Query: 250 EVTIGQPVLTVSGYRHPTEFEDINFELRRGEILGFYGLVGAGRSEFMQSLIGITRPSAGA 309
           E  IG+ VL+V        F+ ++F+L  GEILG  GL+G+GR+   +++ G+T  + G 
Sbjct: 272 EQPIGELVLSVRDLSLDGIFKGVSFDLHAGEILGIAGLMGSGRTNVAEAIFGVTPSTGGE 331

Query: 310 VKLDGEVLVIRSPAEAIRAGIVYVPEERGRQGAIIGMPIFQNVTLPSLSHTSRSGFLRLA 369
           ++LDG+ + I  P  AI  G   + E+R   G    + + +N+ +  L H   +GF++  
Sbjct: 332 IRLDGQPVRISDPHMAIEKGFALLTEDRKLSGLFPCLSVLENMEMAVLPHYVGNGFIQQK 391

Query: 370 EEFALAREYTSRLDLRAAALDQDVGTLSGGNQQKVVIAKWLATRPKVIILDEPTKGIDIG 429
              AL  +   +L ++  +L+Q + TLSGGNQQK ++A+WL T P+++ILDEPT+GID+G
Sbjct: 392 ALRALCEDMCKKLRVKTPSLEQCIDTLSGGNQQKALLARWLMTNPRILILDEPTRGIDVG 451

Query: 430 SKAAVHAFMSELAAQGLSVIMVSSEIPEIMGMSDRVIVMREGRVAGRYERSELTAEKLVR 489
           +KA ++  +S LA++G++VIM+SSE+PE++GMSDRV+VM EG + G  +RSE T E++++
Sbjct: 452 AKAEIYRLISYLASEGMAVIMISSELPEVLGMSDRVMVMHEGDLMGTLDRSEATQERVMQ 511

Query: 490 AAAGI 494
            A+G+
Sbjct: 512 LASGL 516



 Score = 94.0 bits (232), Expect = 1e-23
 Identities = 67/253 (26%), Positives = 123/253 (48%), Gaps = 14/253 (5%)

Query: 250 EVTIGQP----VLTVS-GYRHPTEFEDINFELRRGEILGFYGLVGAGRSEFMQSLIGITR 304
           +V++ +P    V+ VS G+       D+   +R G +L   G  GAG+S  M+ + GI +
Sbjct: 18  DVSLDEPYLLEVVNVSKGFPGVVALSDVQLRVRPGSVLALMGENGAGKSTLMKIIAGIYQ 77

Query: 305 PSAGAVKLDGEVLVIRSPAEAIRAGIVYVPEERGRQGAIIGMPIFQNVTLPSLSHTSRSG 364
           P AG ++L G+ +   +P  A++AGI  + +E      +  M I +N+ +       +  
Sbjct: 78  PDAGELRLRGKPVTFDTPLAALQAGIAMIHQELN---LMPHMSIAENIWIGR----EQLN 130

Query: 365 FLRLAEEFALAREYTSRLDLRAAALD--QDVGTLSGGNQQKVVIAKWLATRPKVIILDEP 422
            L + +   + R     L+     LD  + VG LS   +Q V IAK ++    ++I+DEP
Sbjct: 131 GLHMVDHGEMHRCTARLLERLRIKLDPEEQVGNLSIAERQMVEIAKAVSYDSDILIMDEP 190

Query: 423 TKGIDIGSKAAVHAFMSELAAQGLSVIMVSSEIPEIMGMSDRVIVMREGRVAGRYERSEL 482
           T  I     A + + +++L +QG  +I ++ ++ E+  ++D V V R+G   G      +
Sbjct: 191 TSAITETEVAHLFSIIADLKSQGKGIIYITHKMNEVFAIADEVAVFRDGAYIGLQRADSM 250

Query: 483 TAEKLVRAAAGIE 495
             + L+    G E
Sbjct: 251 DGDSLISMMVGRE 263