Pairwise Alignments

Query, 503 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 508 a.a., L-arabinose ABC transporter ATP-binding protein AraG from Pseudomonas fluorescens SBW25-INTG

 Score =  385 bits (988), Expect = e-111
 Identities = 207/489 (42%), Positives = 311/489 (63%), Gaps = 3/489 (0%)

Query: 5   IALEGISKSFPGVRALSDVSLALYPGSVTALVGENGAGKSTLVKILTGIYQPDAGTIRLG 64
           ++  GI K+FPGV+AL  +S   YPG V AL+GENGAGKSTL+KIL G Y P +GT+++G
Sbjct: 14  LSFNGIGKTFPGVKALDGISFTAYPGQVHALMGENGAGKSTLLKILGGAYIPSSGTLQIG 73

Query: 65  DTETTFPTALAASRAGVTAIHQETVLFDELSVAENIFLGHAPRNRFGLIDWKQLNADAQA 124
           +    F  A  +  +GV  IHQE  L  E++VAEN+FLGH P +RFG+++   L   A A
Sbjct: 74  EQTMAFKNAADSIASGVAVIHQELHLVPEMTVAENLFLGHLP-SRFGVVNRSLLRQQALA 132

Query: 125 LLGRAGADFDPTIRLRDLGIAKKHLVAIARALSVDARVVIMDEPTAALSHKEIHELYDLI 184
            L     + DP  +L  L + ++ LV IA+ALS  A V+  DEPT++LS +EI  L  +I
Sbjct: 133 CLKGLADEIDPQEKLGRLSLGQRQLVEIAKALSRGAHVIAFDEPTSSLSAREIDRLMAII 192

Query: 185 ERLKADGKAVLFISHKFDEIFRIADRYTVFRDGAMIGE-GLIADVSQDDLVRMMVGRAVG 243
            RL+ +GK VL++SH+ +E+FRI +  TVF+DG  +     ++ ++ D LV  MVGR + 
Sbjct: 193 TRLRDEGKVVLYVSHRMEEVFRICNAVTVFKDGRYVRTFDDMSALTHDQLVTCMVGRDIQ 252

Query: 244 SVYPKKEVTIGQPVLTVSGYRHPTEFEDINFELRRGEILGFYGLVGAGRSEFMQSLIGIT 303
            +Y  +    G+  L V G   P   E I+F +R+GEILG +GLVGAGR+E  + L G+ 
Sbjct: 253 DIYDYRPREQGEVALKVDGLLGPGLREPISFNVRKGEILGLFGLVGAGRTELFRLLSGLE 312

Query: 304 RPSAGAVKLDGEVLVIRSPAEAIRAGIVYVPEERGRQGAIIGMPIFQNVTLPSL-SHTSR 362
           R SAG ++L G+ L +RSP +AI AG++  PE+R ++G I    + +N+ + +  +H++ 
Sbjct: 313 RASAGQLELCGQALQLRSPRDAIAAGVLLCPEDRKKEGIIPLSSVAENINISARGAHSAF 372

Query: 363 SGFLRLAEEFALAREYTSRLDLRAAALDQDVGTLSGGNQQKVVIAKWLATRPKVIILDEP 422
              LR   E   A +    + ++     Q +  LSGGNQQK ++ +WL+   KV++LDEP
Sbjct: 373 GWLLRDGWEKRNADQQIQAMKVKTPNAAQKIMYLSGGNQQKAILGRWLSMPMKVLLLDEP 432

Query: 423 TKGIDIGSKAAVHAFMSELAAQGLSVIMVSSEIPEIMGMSDRVIVMREGRVAGRYERSEL 482
           T+GIDIG+KA ++  +  LAAQG++VI+VSS++ E+MG+SDR++V+ EG + G   R   
Sbjct: 433 TRGIDIGAKAEIYQIIHNLAAQGIAVIVVSSDLMEVMGISDRILVLCEGAMRGEQTREHA 492

Query: 483 TAEKLVRAA 491
           T   L++ A
Sbjct: 493 TESNLLQLA 501



 Score = 80.5 bits (197), Expect = 1e-19
 Identities = 63/237 (26%), Positives = 113/237 (47%), Gaps = 10/237 (4%)

Query: 15  PGVRALSDVSLALYPGSVTALVGENGAGKSTLVKILTGIYQPDAGTIRLGDTETTFPTAL 74
           PG+R    +S  +  G +  L G  GAG++ L ++L+G+ +  AG + L        +  
Sbjct: 275 PGLR--EPISFNVRKGEILGLFGLVGAGRTELFRLLSGLERASAGQLELCGQALQLRSPR 332

Query: 75  AASRAGVTAIHQETV---LFDELSVAENIFLG-HAPRNRFGLI---DWKQLNADAQALLG 127
            A  AGV    ++     +    SVAENI +      + FG +    W++ NAD Q    
Sbjct: 333 DAIAAGVLLCPEDRKKEGIIPLSSVAENINISARGAHSAFGWLLRDGWEKRNADQQIQAM 392

Query: 128 RAGADFDPTIRLRDLGIAKKHLVAIARALSVDARVVIMDEPTAALSHKEIHELYDLIERL 187
           +     +   ++  L    +    + R LS+  +V+++DEPT  +      E+Y +I  L
Sbjct: 393 KVKTP-NAAQKIMYLSGGNQQKAILGRWLSMPMKVLLLDEPTRGIDIGAKAEIYQIIHNL 451

Query: 188 KADGKAVLFISHKFDEIFRIADRYTVFRDGAMIGEGLIADVSQDDLVRMMVGRAVGS 244
            A G AV+ +S    E+  I+DR  V  +GAM GE      ++ +L+++ + R++ +
Sbjct: 452 AAQGIAVIVVSSDLMEVMGISDRILVLCEGAMRGEQTREHATESNLLQLALPRSLAN 508