Pairwise Alignments

Query, 503 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 501 a.a., ribose ABC transporter ATP-binding protein RbsA from Escherichia coli Nissle 1917

 Score =  439 bits (1128), Expect = e-127
 Identities = 229/494 (46%), Positives = 327/494 (66%), Gaps = 2/494 (0%)

Query: 1   MKPAIALEGISKSFPGVRALSDVSLALYPGSVTALVGENGAGKSTLVKILTGIYQPDAGT 60
           M+  + L+GI K+FPGV+ALS  +L +YPG V ALVGENGAGKST++K+LTGIY  DAGT
Sbjct: 1   MEALLQLKGIDKAFPGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGT 60

Query: 61  IRLGDTETTFPTALAASRAGVTAIHQETVLFDELSVAENIFLGHAPRNRFGLIDWKQLNA 120
           +     ETTF    ++  AG+  IHQE  L  +L++AENIFLG    NRFG IDWK + A
Sbjct: 61  LLWLGKETTFTGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGKIDWKTMYA 120

Query: 121 DAQALLGRAGADFDPTIRLRDLGIAKKHLVAIARALSVDARVVIMDEPTAALSHKEIHEL 180
           +A  LL +    F     + DL I  + +V IA+ LS +++V+IMDEPT AL+  E   L
Sbjct: 121 EADKLLAKLNLRFKSDKLVGDLSIGDQQMVEIAKVLSFESKVIIMDEPTDALTDTETESL 180

Query: 181 YDLIERLKADGKAVLFISHKFDEIFRIADRYTVFRDGAMIGEGLIADVSQDDLVRMMVGR 240
           + +I  LK  G+ +++ISH+  EIF I D  TVFRDG  I E  +A +++D L+ MMVGR
Sbjct: 181 FRVIRELKLQGRGIVYISHRMKEIFEICDDVTVFRDGQFIAEREVASLTEDSLIEMMVGR 240

Query: 241 AVGSVYPKKEVTIGQPVLTVSGYRHPTEFEDINFELRRGEILGFYGLVGAGRSEFMQSLI 300
            +   YP  +   G   L V     P    D++F LR+GEILG  GL+GAGR+E M+ L 
Sbjct: 241 KLEDQYPHLDKAPGDIRLKVDNLCGP-GVNDVSFTLRKGEILGVSGLMGAGRTELMKVLY 299

Query: 301 GITRPSAGAVKLDGEVLVIRSPAEAIRAGIVYVPEERGRQGAIIGMPIFQNVTLPSLSHT 360
           G    ++G V LDG  +V RSP + +  GIVY+ E+R R G ++GM + +N++L +L + 
Sbjct: 300 GALPRTSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYF 359

Query: 361 SRS-GFLRLAEEFALAREYTSRLDLRAAALDQDVGTLSGGNQQKVVIAKWLATRPKVIIL 419
           SR+ G L+ A+E     ++    +++  +++Q +G LSGGNQQKV IA+ L TRPKV+IL
Sbjct: 360 SRAGGSLKHADEQQAVSDFIRLFNVKTPSMEQAIGLLSGGNQQKVAIARGLMTRPKVLIL 419

Query: 420 DEPTKGIDIGSKAAVHAFMSELAAQGLSVIMVSSEIPEIMGMSDRVIVMREGRVAGRYER 479
           DEPT+G+D+G+K  ++  +++  A GLS+I+VSSE+PE++GMSDR+IVM EG ++G + R
Sbjct: 420 DEPTRGVDVGAKKEIYQLINQFKADGLSIILVSSEMPEVLGMSDRIIVMHEGHLSGEFTR 479

Query: 480 SELTAEKLVRAAAG 493
            + T E L+ AA G
Sbjct: 480 EQATQEVLMAAAVG 493



 Score = 80.1 bits (196), Expect = 2e-19
 Identities = 69/234 (29%), Positives = 109/234 (46%), Gaps = 13/234 (5%)

Query: 15  PGVRALSDVSLALYPGSVTALVGENGAGKSTLVKILTGIYQPDAGTIRLGDTETTFPTAL 74
           PGV   +DVS  L  G +  + G  GAG++ L+K+L G     +G + L   E    +  
Sbjct: 266 PGV---NDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTLDGHEVVTRSPQ 322

Query: 75  AASRAGVTAIHQETV---LFDELSVAENIFLG---HAPRNRFGL--IDWKQLNADAQALL 126
                G+  I ++     L   +SV EN+ L    +  R    L   D +Q  +D   L 
Sbjct: 323 DGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRLF 382

Query: 127 GRAGADFDPTIRLRDLGIAKKHLVAIARALSVDARVVIMDEPTAALSHKEIHELYDLIER 186
                  +  I L   G  +K  VAIAR L    +V+I+DEPT  +      E+Y LI +
Sbjct: 383 NVKTPSMEQAIGLLSGGNQQK--VAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQ 440

Query: 187 LKADGKAVLFISHKFDEIFRIADRYTVFRDGAMIGEGLIADVSQDDLVRMMVGR 240
            KADG +++ +S +  E+  ++DR  V  +G + GE      +Q+ L+   VG+
Sbjct: 441 FKADGLSIILVSSEMPEVLGMSDRIIVMHEGHLSGEFTREQATQEVLMAAAVGK 494