Pairwise Alignments

Query, 598 a.a., acyl-CoA dehydrogenase from Sinorhizobium meliloti 1021

Subject, 596 a.a., acyl-CoA dehydrogenase from Herbaspirillum seropedicae SmR1

 Score =  606 bits (1563), Expect = e-178
 Identities = 316/600 (52%), Positives = 406/600 (67%), Gaps = 6/600 (1%)

Query: 1   MPIYKAPVDDTLFILNDVLGIER-YHNLPGFADVTPDMTAAILGEAAKLAEEVLFPINLS 59
           MP Y AP+ D  F+L+++L +E  +  LP  AD   ++   +L E  K A +VLFP+N S
Sbjct: 1   MPQYNAPLRDMQFVLHELLNVEEVFKELPPHADTNRELVDQVLEEGGKFASQVLFPLNHS 60

Query: 60  GDQEGCKR-HEDGSVTVPKGFKEAYDLYREGGWLGLAAPEEFGGQGLPYTLHTAVGEFMS 118
           GD+EGC    E  +VT PKGFK+AY  Y E GW  L+   EFGGQGLP T++ +  E ++
Sbjct: 61  GDREGCHYDRESKTVTTPKGFKQAYQQYVEAGWAALSCDPEFGGQGLPLTINNSFYEMLN 120

Query: 119 AANMSLMMYPGLTQGAIAAILVHGSEEQKRAYLPKMVDGTWTGTMNLTEPHCGTDLGLLR 178
           ++N +  MYPGL+ GA   +  HGSEEQK+ YLPK+V G WTGTM LTE HCGTDLGLLR
Sbjct: 121 SSNQAWTMYPGLSHGAYECLHAHGSEEQKQLYLPKLVSGEWTGTMCLTEAHCGTDLGLLR 180

Query: 179 TKAVPNGDGSYRISGQKIFISAGEHDMAENVVHLVLARIEGAPDGVKGISLFIVPKFKLD 238
           +KA P  DGSY+I+G KIFISAGE+D++ N++HLVLAR+  AP+G KGISLF+VPKF  +
Sbjct: 181 SKAEPQADGSYKITGNKIFISAGENDVSANIIHLVLARLPDAPEGSKGISLFLVPKFLPN 240

Query: 239 ASGEPGERNGVSCGAIEHKMGIHGNATCVMNYDEATGYLIGTENKGLSAMFVMMNEARLA 298
           A G  G RN + CGAIE KMGIHGNATC MN D ATG+LIG  +KGL AMFV MN ARL 
Sbjct: 241 ADGSLGARNPIFCGAIEEKMGIHGNATCQMNLDGATGWLIGQPHKGLQAMFVFMNAARLG 300

Query: 299 VGMQGLSIAEVAYQNAASYARERIQGRSLSGPKAPDKKADPIIVHPDIRRTLMTIRAFNE 358
           VGMQGL + EVAYQNA  YA++R+Q RSLSG KA DK ADPIIVHPD+RR L+T +AF E
Sbjct: 301 VGMQGLGLTEVAYQNALVYAKDRLQMRSLSGIKAADKPADPIIVHPDVRRMLLTAKAFAE 360

Query: 359 GGRAFTLWTALKSDIAHRSDSEEERQTADDILSLMTPILKGVLTDKGFDHAVMAQQVFGG 418
           GGRAFT + AL+ D       E+ R+ + DI++L+TP++K  LTD  +       QV+GG
Sbjct: 361 GGRAFTSYVALELDKELTHPDEQVRKDSADIVALLTPVVKAFLTDNAWMATSECLQVYGG 420

Query: 419 HGYIEEHGMSQYVRDARIAMIYEGANGIQALDLVGRKLAMNGGRAVMALFKEIGDFCEEN 478
           HGYI E GM QYVRDARI MIYEG N IQ+LDL+GRK+ M+ G  +     +I  F EE+
Sbjct: 421 HGYIAEWGMEQYVRDARINMIYEGTNTIQSLDLLGRKILMDNGAKLKKFGAQIQAFVEEH 480

Query: 479 RGDEKLSGYTKALKKGLNDLQAATMWFMQNAMAKPDNAGAGSTDYMHLFGLVVLGYMWAR 538
             DE +S +   L    + +   TM     + A  D AGA +  Y+ + G +V  Y++AR
Sbjct: 481 GTDESMSEFITPLADIGDKVTKLTMEIGMKSFANQDEAGAAAVPYLRVVGHLVFSYLFAR 540

Query: 539 MAKTAEEKLAAGETQRADYLKNKLITARFFMERILPETELRKIRIETGADTMMALDAAAF 598
           MAK A EK  +G++    +   KL TARF+  R+LPET +   +  +GA  +MALDA  F
Sbjct: 541 MAKIALEKQDSGDS----FYAAKLATARFYFARLLPETAMLIRQARSGAANLMALDAELF 596