Pairwise Alignments

Query, 512 a.a., lipoprotein from Sinorhizobium meliloti 1021

Subject, 285 a.a., peptigoglycan-binding protein LysM from Pseudomonas fluorescens FW300-N2E3

 Score =  123 bits (308), Expect = 1e-32
 Identities = 80/236 (33%), Positives = 120/236 (50%), Gaps = 14/236 (5%)

Query: 280 GAYTVKPGDSLNRIAKANGVSVAALKQANGLSTE-AIRIGQKLNIPSASAKTPA---TDA 335
           G Y V+ GD+L  IA   G    AL   N + T   I  GQ +     S  TP    T +
Sbjct: 57  GQYVVRRGDTLFSIAFRYGWDYKALAARNNIPTPYTIHPGQTIRFDGRSGSTPTEVVTPS 116

Query: 336 VVTASVSAKKNEAQAASTEQGKLTETKAPAAKESVSEVAIRSDGNEDLPKSTGIGKYRWP 395
             TAS S+K    +  ++      +T AP+     +   +   G    P  TG G   WP
Sbjct: 117 GTTASPSSKFTVTRGPASGATTAKQTAAPSVANKPTPAPLPPAG----PAPTGWG---WP 169

Query: 396 VRGAVVAAYGANVDGNRNDGINISVPEGTPIKAAENGVVIYSGSSLKELGNAVLVRHDDG 455
             G ++  + +N  G+ N GI+I+   G P+ AA +G V+Y+GS L+  G  V+++H D 
Sbjct: 170 SNGILIGKFSSN--GSLNKGIDIAGDLGQPVLAASDGTVVYAGSGLRGYGELVIIKHSDT 227

Query: 456 TVTVYGNAAELKVQRGQKVQRGQTLASSGMTGRATRPQVHFEVRKNATPVNPATYL 511
            V+ YG+   L V+ GQ+V+ GQT+A  G TG   R ++HFE+R+   PV+P  +L
Sbjct: 228 YVSAYGHNRRLLVREGQQVKVGQTIAEMGSTG-TDRVKLHFEIRRQGKPVDPLQFL 282



 Score = 32.7 bits (73), Expect = 2e-05
 Identities = 34/149 (22%), Positives = 57/149 (38%), Gaps = 34/149 (22%)

Query: 126 QVQTASLESQAAALPKAEPLAGAAKDMSGK-----GGWSASNAPTI-----MVRQGDTVT 175
           ++ T S +     L  +  L G +   SG         +A+  P +     +VR+GDT+ 
Sbjct: 9   RIGTTSFQRLVTGLVLSSLLVGCSSTRSGDVRVVDRNNAAAQRPAVTTGQYVVRRGDTLF 68

Query: 176 VLARRFGVPEKEILKANGLKSASQVEPGQ-------------RLVIPTFGTAGSAAK--- 219
            +A R+G   K +   N + +   + PGQ              +V P+  TA  ++K   
Sbjct: 69  SIAFRYGWDYKALAARNNIPTPYTIHPGQTIRFDGRSGSTPTEVVTPSGTTASPSSKFTV 128

Query: 220 --------AAASGSIADVEGGKKRPSPLP 240
                     A  + A     K  P+PLP
Sbjct: 129 TRGPASGATTAKQTAAPSVANKPTPAPLP 157