Pairwise Alignments

Query, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 526 a.a., microcin ABC transporter ATP-binding protein from Pseudomonas fluorescens FW300-N2C3

 Score =  416 bits (1068), Expect = e-120
 Identities = 225/524 (42%), Positives = 329/524 (62%), Gaps = 11/524 (2%)

Query: 4   DKLLTVCGLSLEVARTGQQVVKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPPTIK 63
           D L+ +  LS  VA   Q VV+++  D+ PGE   +VGESGSGK++   +++ LLP T  
Sbjct: 3   DNLIEIRDLS--VAFNDQTVVRNLCLDIRPGECLALVGESGSGKSVTAHSILQLLPETGT 60

Query: 64  VADGSVSYKGRDVLKMKENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHTKA 123
              GS+ Y+G+++L  +   LR LRG  I ++FQEPMTSLNP  ++ +Q+ E L+LH   
Sbjct: 61  RTTGSIRYRGQELLGAEAKTLRELRGNRIAMIFQEPMTSLNPLHSVEKQIGETLMLHRGQ 120

Query: 124 SAQERRSLILDMLKRVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIADEPTT 183
             +  R  IL++L  VGI+ P   L +YPH+ SGG RQR+M+A  +  +P LLIADEPTT
Sbjct: 121 GGKAARQRILELLALVGIQKPAERLKAYPHQLSGGQRQRVMIAMALACEPELLIADEPTT 180

Query: 184 ALDAVIQRDVMELMVELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRTEDLL 243
           ALD  +QR ++ L+  L +  G ++LLISHDL +V     R+ VM+ G IVE+   E L 
Sbjct: 181 ALDVTVQRKILLLLKSLQQRLGMSLLLISHDLNLVRSIAQRVCVMKAGEIVEQAPCETLF 240

Query: 244 KAPQHPYTKKLLSSLP-FRGRPRQIDLTSVPMISARDIIVDYAGRKSLFRKNKPKRALHG 302
            AP+HPY+ +LL + P     PR        ++  RD+ V +A    LFR+ +  RA+ G
Sbjct: 241 SAPKHPYSCELLHAEPEGEALPRD---EREDVLQVRDLRVSFALGGGLFRRKEYLRAVDG 297

Query: 303 VSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVTESEGRIQFQGRPRTE----NWTDYRLN 358
           +S+ I  G+ + +VG SGSGK+TLG+ I  L+ ESEG I FQG+   +        +R  
Sbjct: 298 ISLSIQRGKTLGIVGESGSGKSTLGQAILRLI-ESEGSIHFQGQALEQLSHKALRPWRRK 356

Query: 359 CQMVFQDPYSSLDPRMTIEALVEEALRPVPGLDGKAKRKRTLETLEEVGLGVDYAGRYPH 418
            Q+VFQDP+ SL PRM+++ ++ E L        +    + ++ L+EVGL      RYPH
Sbjct: 357 MQVVFQDPFGSLSPRMSVQQIISEGLEVHSPSSPEECEAQVIQALKEVGLDPQSRHRYPH 416

Query: 419 ELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISH 478
           E SGGQRQR+AIARA+  +P  ++ DEP SALD TV+ QV+ L   LQ+++G + LFISH
Sbjct: 417 EFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQKQVVALLRQLQEKHGLTYLFISH 476

Query: 479 DLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPKEAYTRRLLSA 522
           DL VV  +A  ++V++DG+++E+G    +FDSP+  YT+ LL+A
Sbjct: 477 DLAVVRALAHDMIVIKDGKVVEQGASHDVFDSPRHPYTKELLAA 520



 Score =  171 bits (434), Expect = 5e-47
 Identities = 106/249 (42%), Positives = 149/249 (59%), Gaps = 14/249 (5%)

Query: 300 LHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGLV----TESEGRIQFQGRP----RTEN 351
           +  + +DI  GE +ALVG SGSGK+    +I  L+    T + G I+++G+       + 
Sbjct: 21  VRNLCLDIRPGECLALVGESGSGKSVTAHSILQLLPETGTRTTGSIRYRGQELLGAEAKT 80

Query: 352 WTDYRLN-CQMVFQDPYSSLDPRMTIEALVEEALRPVPGLDGKAKRKRTLETLEEVGLG- 409
             + R N   M+FQ+P +SL+P  ++E  + E L    G  GKA R+R LE L  VG+  
Sbjct: 81  LRELRGNRIAMIFQEPMTSLNPLHSVEKQIGETLMLHRGQGGKAARQRILELLALVGIQK 140

Query: 410 -VDYAGRYPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKR 468
             +    YPH+LSGGQRQRV IA A+A  P  LIADEP +ALDVTV+ ++L L   LQ+R
Sbjct: 141 PAERLKAYPHQLSGGQRQRVMIAMALACEPELLIADEPTTALDVTVQRKILLLLKSLQQR 200

Query: 469 YGFSCLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPKEAYTRRLLSAIP---A 525
            G S L ISHDL +V  +A RV VM+ G I+E+   +T+F +PK  Y+  LL A P   A
Sbjct: 201 LGMSLLLISHDLNLVRSIAQRVCVMKAGEIVEQAPCETLFSAPKHPYSCELLHAEPEGEA 260

Query: 526 LDQNEKGGV 534
           L ++E+  V
Sbjct: 261 LPRDEREDV 269