Pairwise Alignments

Query, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 536 a.a., microcin ABC transporter ATP-binding protein from Pseudomonas fluorescens FW300-N2E3

 Score =  415 bits (1066), Expect = e-120
 Identities = 227/530 (42%), Positives = 336/530 (63%), Gaps = 11/530 (2%)

Query: 1   MTMDKLLTVCGLSLE--VARTGQQVVKSVSFDLAPGEIFGIVGESGSGKTLATRALISLL 58
           M  D L+ V  LS+E  V  + Q+VV+ VSFD+  GE   +VGESGSGK++   +++ LL
Sbjct: 1   MNQDNLIEVRNLSVEFVVGESVQRVVEGVSFDIKRGETLALVGESGSGKSVTAHSILRLL 60

Query: 59  P-PTIKVADGSVSYKGRDVLKMKENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGL 117
           P P  +   G+++Y G D+L +KE  +RH+RG  I ++FQEPMTSLNP  +I +Q+ E L
Sbjct: 61  PYPLARHPTGTITYSGHDLLSLKEKTIRHIRGNRIAMIFQEPMTSLNPLHSIEKQINEVL 120

Query: 118 ILHTKASAQERRSLILDMLKRVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLI 177
            +H   + +      L++L+ VGI +P   L + PHE SGG RQR+M+A  +  +P LLI
Sbjct: 121 GIHKGLTGKVATQRTLELLELVGIPEPHKRLRALPHELSGGQRQRVMIAMALANEPELLI 180

Query: 178 ADEPTTALDAVIQRDVMELMVELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKG 237
           ADEPTTALD  +Q  ++EL+ EL    G A+LLISHDL +V R   R+ VM+KG IVE+ 
Sbjct: 181 ADEPTTALDVTVQLKILELLKELQARLGMALLLISHDLNLVQRVAHRVCVMQKGCIVEQA 240

Query: 238 RTEDLLKAPQHPYTKKLLSSLPFRGRPRQIDLTSVPMISARDIIVDYAGRKSLFRKNKP- 296
             E+L +APQHPYT++LL++ P RG P   ++   P++   D+ V +  +K   R     
Sbjct: 241 SCEELFRAPQHPYTRELLAAEP-RGNP-ATNVIGPPLLQVEDLKVWFPIKKGFLRNTVDY 298

Query: 297 KRALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVTESEGRIQFQGRP----RTENW 352
            +A+ G++  + +G+ + +VG SGSGK+TLG  I  L+  S+G I+F+G+       +  
Sbjct: 299 VKAVDGINFSLPQGQTLGIVGESGSGKSTLGLAILRLIA-SKGAIRFEGKSLDCLSQQQV 357

Query: 353 TDYRLNCQMVFQDPYSSLDPRMTIEALVEEALRPVPGLDGKAKRKRTLETLEEVGLGVDY 412
              R   Q+VFQDP+ SL PRM++  +V E LR         +    +  L+EVGL    
Sbjct: 358 RPLRREMQVVFQDPFGSLSPRMSVSQIVGEGLRIHRIGTETEQELAIIAVLKEVGLDPAT 417

Query: 413 AGRYPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGFS 472
             RYPHE SGGQRQR+AIARA+  +P  ++ DEP SALD TV+ QV++L   LQ +Y  +
Sbjct: 418 RHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRSLQSKYNLT 477

Query: 473 CLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPKEAYTRRLLSA 522
            LFISHDL VV+ ++ +++V++ G+++E+GD   IF +P+  YT++LL A
Sbjct: 478 YLFISHDLAVVKALSHQLMVIKHGQVVEQGDAQGIFAAPQHPYTQQLLEA 527



 Score =  181 bits (458), Expect = 8e-50
 Identities = 112/263 (42%), Positives = 155/263 (58%), Gaps = 18/263 (6%)

Query: 274 MISARDIIVDYAGRKSLFRKNKPKRALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGL 333
           +I  R++ V++   +S+      +R + GVS DI  GE +ALVG SGSGK+    +I  L
Sbjct: 6   LIEVRNLSVEFVVGESV------QRVVEGVSFDIKRGETLALVGESGSGKSVTAHSILRL 59

Query: 334 VT-----ESEGRIQFQGRP----RTENWTDYRLN-CQMVFQDPYSSLDPRMTIEALVEEA 383
           +         G I + G      + +     R N   M+FQ+P +SL+P  +IE  + E 
Sbjct: 60  LPYPLARHPTGTITYSGHDLLSLKEKTIRHIRGNRIAMIFQEPMTSLNPLHSIEKQINEV 119

Query: 384 LRPVPGLDGKAKRKRTLETLEEVGLGVDYAG--RYPHELSGGQRQRVAIARAIARRPRFL 441
           L    GL GK   +RTLE LE VG+   +      PHELSGGQRQRV IA A+A  P  L
Sbjct: 120 LGIHKGLTGKVATQRTLELLELVGIPEPHKRLRALPHELSGGQRQRVMIAMALANEPELL 179

Query: 442 IADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIEE 501
           IADEP +ALDVTV+ ++L+L  +LQ R G + L ISHDL +V++VA RV VMQ G I+E+
Sbjct: 180 IADEPTTALDVTVQLKILELLKELQARLGMALLLISHDLNLVQRVAHRVCVMQKGCIVEQ 239

Query: 502 GDRDTIFDSPKEAYTRRLLSAIP 524
              + +F +P+  YTR LL+A P
Sbjct: 240 ASCEELFRAPQHPYTRELLAAEP 262