Pairwise Alignments

Query, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 526 a.a., microcin ABC transporter ATP-binding protein from Pseudomonas fluorescens FW300-N2E3

 Score =  401 bits (1031), Expect = e-116
 Identities = 213/513 (41%), Positives = 318/513 (61%), Gaps = 7/513 (1%)

Query: 14  LEVARTGQQVVKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPPTIKVADGSVSYKG 73
           L VA +GQ  V++V  D+ PGE   +VGESGSGK++  ++++ LLP       GS+ Y+G
Sbjct: 11  LNVAFSGQAAVRNVCLDIRPGECLALVGESGSGKSVTAQSILQLLPDGGTETRGSIRYRG 70

Query: 74  RDVLKMKENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHTKASAQERRSLIL 133
           ++++      LR LRG  I ++FQEPMTSLNP  ++ +Q+ E L++H     +  +   L
Sbjct: 71  QELIGADVATLRALRGNRIAMIFQEPMTSLNPLHSVEKQIGETLLVHKGLGDKAAQKRTL 130

Query: 134 DMLKRVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIADEPTTALDAVIQRDV 193
           ++L+ VGI+ PE  L +YPH+ SGG RQR+M+A  +  +P LLIADEPTTALD  +QR +
Sbjct: 131 ELLELVGIKKPEERLKAYPHQLSGGQRQRVMIAMALACEPELLIADEPTTALDVTVQRKI 190

Query: 194 MELMVELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRTEDLLKAPQHPYTKK 253
           + L+  L +  G ++LLISHDL +V     R+ VM  G IVE+   E L   PQHPY++ 
Sbjct: 191 LRLLKSLQQRLGMSLLLISHDLNLVRSIAQRVCVMHAGEIVEQAECERLFNHPQHPYSRL 250

Query: 254 LLSSLPFRGRPRQIDLTSVPMISARDIIVDYAGRKSLFRKNKPKRALHGVSIDIHEGEVV 313
           LL++ P  G P   D   V ++   D+ V +     LF++     A+ G+S+ I  G+ +
Sbjct: 251 LLNAEP-EGEPLPRDEREV-VLEVNDLNVRFPLGGGLFQRKTWLHAVDGISLSIQRGKTL 308

Query: 314 ALVGGSGSGKTTLGRTIAGLVTESEGRIQFQGRP----RTENWTDYRLNCQMVFQDPYSS 369
            +VG SGSGK+TLG+ I  L+ +S+G I+FQG        +    +R   Q+VFQDP+ S
Sbjct: 309 GIVGESGSGKSTLGQAILRLL-DSDGSIRFQGEALDSLNQKQLRPWRKQMQVVFQDPFGS 367

Query: 370 LDPRMTIEALVEEALRPVPGLDGKAKRKRTLETLEEVGLGVDYAGRYPHELSGGQRQRVA 429
           L PRM++  ++ E L             + ++ L+EVGL      RYPHE SGGQRQR+A
Sbjct: 368 LSPRMSVAQIISEGLEVHSQSSAAECETQVIQVLKEVGLDPQSRHRYPHEFSGGQRQRIA 427

Query: 430 IARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADR 489
           IARA+  +P  ++ DEP SALD TV+ QV+ L   LQ++YG + LFISHDL V+  +A  
Sbjct: 428 IARALVLKPALILLDEPTSALDRTVQKQVVALLRQLQEKYGLTYLFISHDLAVIRALAHD 487

Query: 490 VVVMQDGRIIEEGDRDTIFDSPKEAYTRRLLSA 522
           ++V++DG+++E G    +F +P+  YT+ LL+A
Sbjct: 488 MIVIKDGKVVERGASHDVFAAPQHPYTKELLAA 520



 Score =  179 bits (454), Expect = 2e-49
 Identities = 111/262 (42%), Positives = 156/262 (59%), Gaps = 21/262 (8%)

Query: 274 MISARDIIVDYAGRKSLFRKNKPKRALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGL 333
           +I  RD+ V ++G+           A+  V +DI  GE +ALVG SGSGK+   ++I  L
Sbjct: 5   LIEIRDLNVAFSGQA----------AVRNVCLDIRPGECLALVGESGSGKSVTAQSILQL 54

Query: 334 V----TESEGRIQFQGRPR----TENWTDYRLN-CQMVFQDPYSSLDPRMTIEALVEEAL 384
           +    TE+ G I+++G+             R N   M+FQ+P +SL+P  ++E  + E L
Sbjct: 55  LPDGGTETRGSIRYRGQELIGADVATLRALRGNRIAMIFQEPMTSLNPLHSVEKQIGETL 114

Query: 385 RPVPGLDGKAKRKRTLETLEEVGLGV--DYAGRYPHELSGGQRQRVAIARAIARRPRFLI 442
               GL  KA +KRTLE LE VG+    +    YPH+LSGGQRQRV IA A+A  P  LI
Sbjct: 115 LVHKGLGDKAAQKRTLELLELVGIKKPEERLKAYPHQLSGGQRQRVMIAMALACEPELLI 174

Query: 443 ADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIEEG 502
           ADEP +ALDVTV+ ++L L   LQ+R G S L ISHDL +V  +A RV VM  G I+E+ 
Sbjct: 175 ADEPTTALDVTVQRKILRLLKSLQQRLGMSLLLISHDLNLVRSIAQRVCVMHAGEIVEQA 234

Query: 503 DRDTIFDSPKEAYTRRLLSAIP 524
           + + +F+ P+  Y+R LL+A P
Sbjct: 235 ECERLFNHPQHPYSRLLLNAEP 256