Pairwise Alignments

Query, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 553 a.a., ABC-type uncharacterized transport system, duplicated ATPase component from Pseudomonas stutzeri RCH2

 Score =  402 bits (1033), Expect = e-116
 Identities = 223/528 (42%), Positives = 335/528 (63%), Gaps = 13/528 (2%)

Query: 4   DKLLTVCGLSLEVARTGQQV---VKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLP- 59
           + L+ V  L++E   TG+QV   V+ V+FD+  GE   +VGESGSGK++   +++ LLP 
Sbjct: 8   ENLVEVRDLAVEFV-TGEQVQRVVEGVTFDIRKGETLALVGESGSGKSVTAHSILRLLPY 66

Query: 60  PTIKVADGSVSYKGRDVLKMKENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLIL 119
           P  +   G + + G+D+LK  E  +R +RG  I +VFQEPMTSLNP  T+G+Q+ E L +
Sbjct: 67  PLARHPQGQILFHGQDLLKADEKAMRKIRGNRIAMVFQEPMTSLNPLHTVGKQINEVLEI 126

Query: 120 HTKASAQERRSLILDMLKRVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIAD 179
           H     +   +  L++L+ VGI +P   + +YPHE SGG RQR+++A  +  +P LLIAD
Sbjct: 127 HKGLRGKAATARTLELLELVGIPEPRKRIRAYPHELSGGQRQRVVIAMALANEPELLIAD 186

Query: 180 EPTTALDAVIQRDVMELMVELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRT 239
           EPTTALD  +Q  ++EL+ EL    G A+LLISHDL +V R   R+ VM++G +VE+   
Sbjct: 187 EPTTALDVTVQLKILELLKELQARLGMALLLISHDLNLVRRIAHRVCVMQRGRVVEQALC 246

Query: 240 EDLLKAPQHPYTKKLLSSLPFRGRPRQIDLTSVPMISARDIIVDYAGRKSLFRKNKPK-R 298
           EDL +APQHPYT++LL++ P  G P  ++  + P++   D+ V +  +K L R+     +
Sbjct: 247 EDLFRAPQHPYTQELLAAEP-SGGPVAVE-EAPPLLEVDDLRVWFPIKKGLLRRTVDHIK 304

Query: 299 ALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVTESEGRIQFQGR----PRTENWTD 354
           A+ GV+  + +G+ + +VG SGSGK+TLG  I  L+  S G I+FQG+            
Sbjct: 305 AVDGVNFSLPKGQTLGIVGESGSGKSTLGLAILRLL-GSRGEIRFQGQHLQSMSQRQVRP 363

Query: 355 YRLNCQMVFQDPYSSLDPRMTIEALVEEALRPVPGLDGKAKRKRTLETLEEVGLGVDYAG 414
            R   Q+VFQDP+ SL PRM++  +V E L      + K + +  +E L EVGL  +   
Sbjct: 364 LRRQMQVVFQDPFGSLSPRMSVGQIVGEGLHIHRMGNAKEQEQAIIEALVEVGLDPETRH 423

Query: 415 RYPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGFSCL 474
           RYPHE SGGQRQR+AIARA+  +P  ++ DEP SALD TV+ QV++L   LQ +Y  + L
Sbjct: 424 RYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRSLQAKYNLTYL 483

Query: 475 FISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPKEAYTRRLLSA 522
           FISHDL VV  ++ +++V++ G+++E+G    IF +P+  YT++LL +
Sbjct: 484 FISHDLAVVRALSHQMMVVKQGQVVEQGAAADIFAAPQHPYTQQLLES 531



 Score =  183 bits (465), Expect = 1e-50
 Identities = 109/264 (41%), Positives = 158/264 (59%), Gaps = 18/264 (6%)

Query: 274 MISARDIIVDYAGRKSLFRKNKPKRALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGL 333
           ++  RD+ V++   + +      +R + GV+ DI +GE +ALVG SGSGK+    +I  L
Sbjct: 10  LVEVRDLAVEFVTGEQV------QRVVEGVTFDIRKGETLALVGESGSGKSVTAHSILRL 63

Query: 334 VT-----ESEGRIQFQGRP--RTENWTDYRLN---CQMVFQDPYSSLDPRMTIEALVEEA 383
           +        +G+I F G+   + +     ++      MVFQ+P +SL+P  T+   + E 
Sbjct: 64  LPYPLARHPQGQILFHGQDLLKADEKAMRKIRGNRIAMVFQEPMTSLNPLHTVGKQINEV 123

Query: 384 LRPVPGLDGKAKRKRTLETLEEVGLGVDYAG--RYPHELSGGQRQRVAIARAIARRPRFL 441
           L    GL GKA   RTLE LE VG+         YPHELSGGQRQRV IA A+A  P  L
Sbjct: 124 LEIHKGLRGKAATARTLELLELVGIPEPRKRIRAYPHELSGGQRQRVVIAMALANEPELL 183

Query: 442 IADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIEE 501
           IADEP +ALDVTV+ ++L+L  +LQ R G + L ISHDL +V ++A RV VMQ GR++E+
Sbjct: 184 IADEPTTALDVTVQLKILELLKELQARLGMALLLISHDLNLVRRIAHRVCVMQRGRVVEQ 243

Query: 502 GDRDTIFDSPKEAYTRRLLSAIPA 525
              + +F +P+  YT+ LL+A P+
Sbjct: 244 ALCEDLFRAPQHPYTQELLAAEPS 267