Pairwise Alignments

Query, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 539 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  427 bits (1099), Expect = e-124
 Identities = 230/531 (43%), Positives = 344/531 (64%), Gaps = 11/531 (2%)

Query: 1   MTMDKLLTVCGLSLEVARTGQQV--VKSVSFDLAPGEIFGIVGESGSGKTLATRALISLL 58
           M+ + LL V  LS+        V  VK+VSFD+ PGE   IVGESGSGK+++T AL+ LL
Sbjct: 1   MSPNPLLQVRNLSVSFTTNDGVVDAVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQLL 60

Query: 59  PPTIKV-ADGSVSYKGRDVLKMKENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGL 117
           P   ++  + S+ ++G ++L   + ++R +RG  IG++FQEPMTSLNP M +G Q+ E +
Sbjct: 61  PKNARIHPESSIMFEGEELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVAEAI 120

Query: 118 ILHTKASAQERRSLILDMLKRVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLI 177
             H   S  + +  +L++ + V + DP+GA   +PHEFSGG  QRIM+A  ++ +P +LI
Sbjct: 121 RCHRNVSQNQAKQRVLELFQLVHLPDPKGAYQKFPHEFSGGQLQRIMIAMALINEPDILI 180

Query: 178 ADEPTTALDAVIQRDVMELMVELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKG 237
           ADEPTTALD  +Q +V+ L+ E+    G AIL I+HDL +V     R++VM KG +VE+G
Sbjct: 181 ADEPTTALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDVVEQG 240

Query: 238 RTEDLLKAPQHPYTKKLLSSLPFRGRPRQIDLTSVPMISARDIIVDYAGRK-SLFRKNKP 296
            TE L   P+H YT+ L++S+P +G    + + + P++ A DI V +  +   + R+N+ 
Sbjct: 241 STEQLFLQPEHDYTRMLINSIP-KGSKDPVAVDAAPLLKAEDIRVKFLVKPYFISRRNQY 299

Query: 297 KRALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVTESEGRIQFQGRPRTENWTDYR 356
             A+ G+S+++ +GE + +VG SGSGK+TLGR + GL+  S G+I F+G+         R
Sbjct: 300 FEAVKGISLELKQGETLGIVGESGSGKSTLGRALIGLL-PSTGQIAFKGQDFRALSEKQR 358

Query: 357 L----NCQMVFQDPYSSLDPRMTI-EALVEEALRPVPGLDGKAKRKRTLETLEEVGLGVD 411
           L    + QMVFQDPY SL PRMT+ E + E  L   P +    + +R    LEEV L  +
Sbjct: 359 LALKKDIQMVFQDPYGSLSPRMTVGEIITEGLLVHQPHISKLERMQRARRALEEVRLDPN 418

Query: 412 YAGRYPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGF 471
              RYPHE SGGQRQR+AIARA+   P F++ DEP SALD +V+  V++L  ++QKR   
Sbjct: 419 SINRYPHEFSGGQRQRIAIARALILEPSFILLDEPTSALDRSVQLTVIELLKEIQKRRNI 478

Query: 472 SCLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPKEAYTRRLLSA 522
             LFISHDL VV+ ++DRV+VMQ G+++E+G  ++IF +P+  YT++L++A
Sbjct: 479 GYLFISHDLAVVKALSDRVLVMQKGQVMEQGSAESIFHNPQHEYTKKLIAA 529



 Score =  166 bits (419), Expect = 3e-45
 Identities = 104/266 (39%), Positives = 151/266 (56%), Gaps = 22/266 (8%)

Query: 273 PMISARDIIVDYAGRKSLFRKNKPKRALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAG 332
           P++  R++ V +     +        A+  VS DI  GE +A+VG SGSGK+     +  
Sbjct: 5   PLLQVRNLSVSFTTNDGVVD------AVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQ 58

Query: 333 LVTES-----EGRIQFQGRPRTENWTDYRLN------CQMVFQDPYSSLDPRMTIEALVE 381
           L+ ++     E  I F+G     N TD ++         M+FQ+P +SL+P M +   V 
Sbjct: 59  LLPKNARIHPESSIMFEGEELL-NKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVA 117

Query: 382 EALRPVPGLDGKAKRKRTLETLEEVGLGVDYAGRY---PHELSGGQRQRVAIARAIARRP 438
           EA+R    +     ++R LE  + V L  D  G Y   PHE SGGQ QR+ IA A+   P
Sbjct: 118 EAIRCHRNVSQNQAKQRVLELFQLVHLP-DPKGAYQKFPHEFSGGQLQRIMIAMALINEP 176

Query: 439 RFLIADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRI 498
             LIADEP +ALDVTV+A+VL L  ++Q   G + LFI+HDLGVV+ VADRV+VM  G +
Sbjct: 177 DILIADEPTTALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDV 236

Query: 499 IEEGDRDTIFDSPKEAYTRRLLSAIP 524
           +E+G  + +F  P+  YTR L+++IP
Sbjct: 237 VEQGSTEQLFLQPEHDYTRMLINSIP 262