Pairwise Alignments

Query, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 525 a.a., ABC transporter from Pseudomonas syringae pv. syringae B728a

 Score =  406 bits (1043), Expect = e-117
 Identities = 216/514 (42%), Positives = 328/514 (63%), Gaps = 8/514 (1%)

Query: 14  LEVARTGQQVVKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPPTIKVADGSVSYKG 73
           L VA  GQ+VV ++S D+  GE   +VGESGSGK++   +++ LLP +  +  GS++Y+G
Sbjct: 11  LSVAFNGQKVVSNLSLDVRRGECLALVGESGSGKSVTAHSILQLLPRSGTLTTGSITYRG 70

Query: 74  RDVLKMKENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHTKASAQERRSLIL 133
           + ++   +  LR LRG  I ++FQEPMTSLNP  ++ +Q+ E L+LH   S +E +  I+
Sbjct: 71  QQLVGADDRTLRELRGNRIAMIFQEPMTSLNPLHSVAKQIGETLLLHRGVSGREAQKRIV 130

Query: 134 DMLKRVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIADEPTTALDAVIQRDV 193
           ++L+ VGI+ PE  L +YPHE SGG RQR+M+A  +  +P LLIADEPTTALD  +QR +
Sbjct: 131 ELLELVGIQQPEKRLKAYPHELSGGQRQRVMIAMALACEPELLIADEPTTALDVTVQRKI 190

Query: 194 MELMVELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRTEDLLKAPQHPYTKK 253
           + L+ EL +    ++LLISHDL +V     R+ VM  G IVE+   + L K+PQHPY++ 
Sbjct: 191 LLLLKELQQRLNMSLLLISHDLNLVHSVAQRVCVMRAGEIVEQSDCKSLFKSPQHPYSRL 250

Query: 254 LLSSLPFRGRPRQIDLTSVPMISARDIIVDYAGRKSLFRKNKP-KRALHGVSIDIHEGEV 312
           LL + P  G P   D T   ++   ++ V ++    + R+++   +A+  +S+ I  G+ 
Sbjct: 251 LLDAEP-AGEPLPRD-TRETVLQVDNLKVWFSLTGGILRRHREYLKAVDDISLSIERGKT 308

Query: 313 VALVGGSGSGKTTLGRTIAGLVTESEGRIQFQGRP----RTENWTDYRLNCQMVFQDPYS 368
           + +VG SGSGK+TLG+ I  L+ ES G I+F+G+       +    +R   Q+VFQDPY 
Sbjct: 309 LGIVGESGSGKSTLGQAILRLL-ESRGSIRFRGQALDGLSQKQMRPWRKEMQVVFQDPYG 367

Query: 369 SLDPRMTIEALVEEALRPVPGLDGKAKRKRTLETLEEVGLGVDYAGRYPHELSGGQRQRV 428
           SL PRM++  ++ E L      +        +  LEEVG+      RYPHE SGGQRQR+
Sbjct: 368 SLSPRMSVAQIISEGLEVHSQYNPAKCDAEVIRALEEVGIDPQSRHRYPHEFSGGQRQRI 427

Query: 429 AIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVAD 488
           AIARA+  +P  ++ DEP SALD TV+ QV+ L  +LQ+++G + LFISHDL VV+ +A 
Sbjct: 428 AIARALVLKPALILLDEPTSALDRTVQKQVVALLRELQEKHGLTYLFISHDLAVVKALAH 487

Query: 489 RVVVMQDGRIIEEGDRDTIFDSPKEAYTRRLLSA 522
            V+V++DG+++E G    +F++P+  YT+ LL+A
Sbjct: 488 DVIVVKDGKVVERGASHDVFEAPQHPYTQELLAA 521



 Score =  171 bits (433), Expect = 6e-47
 Identities = 108/263 (41%), Positives = 151/263 (57%), Gaps = 21/263 (7%)

Query: 274 MISARDIIVDYAGRKSLFRKNKPKRALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGL 333
           +I  RD+ V + G+K           +  +S+D+  GE +ALVG SGSGK+    +I  L
Sbjct: 5   LIEIRDLSVAFNGQK----------VVSNLSLDVRRGECLALVGESGSGKSVTAHSILQL 54

Query: 334 VTES----EGRIQFQGRPRT----ENWTDYRLN-CQMVFQDPYSSLDPRMTIEALVEEAL 384
           +  S     G I ++G+           + R N   M+FQ+P +SL+P  ++   + E L
Sbjct: 55  LPRSGTLTTGSITYRGQQLVGADDRTLRELRGNRIAMIFQEPMTSLNPLHSVAKQIGETL 114

Query: 385 RPVPGLDGKAKRKRTLETLEEVGLGVDYAG--RYPHELSGGQRQRVAIARAIARRPRFLI 442
               G+ G+  +KR +E LE VG+         YPHELSGGQRQRV IA A+A  P  LI
Sbjct: 115 LLHRGVSGREAQKRIVELLELVGIQQPEKRLKAYPHELSGGQRQRVMIAMALACEPELLI 174

Query: 443 ADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIEEG 502
           ADEP +ALDVTV+ ++L L  +LQ+R   S L ISHDL +V  VA RV VM+ G I+E+ 
Sbjct: 175 ADEPTTALDVTVQRKILLLLKELQQRLNMSLLLISHDLNLVHSVAQRVCVMRAGEIVEQS 234

Query: 503 DRDTIFDSPKEAYTRRLLSAIPA 525
           D  ++F SP+  Y+R LL A PA
Sbjct: 235 DCKSLFKSPQHPYSRLLLDAEPA 257