Pairwise Alignments

Query, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 536 a.a., ABC transporter from Pseudomonas syringae pv. syringae B728a

 Score =  405 bits (1042), Expect = e-117
 Identities = 222/531 (41%), Positives = 337/531 (63%), Gaps = 13/531 (2%)

Query: 1   MTMDKLLTVCGLSLEVAR--TGQQVVKSVSFDLAPGEIFGIVGESGSGKTLATRALISLL 58
           M  D L+ +  L++E     + Q+VV+++SFD+  GE   +VGESGSGK++   +++ LL
Sbjct: 1   MNNDNLIEIRDLAVEFVTGDSRQRVVENISFDIRRGETLALVGESGSGKSVTAHSILRLL 60

Query: 59  P-PTIKVADGSVSYKGRDVLKMKENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGL 117
           P P      G++ Y G D+LK++E +LR +RG  I ++FQEPMTSLNP  ++ +Q+ E L
Sbjct: 61  PYPIASHPSGTIHYAGEDLLKVEEKKLRTIRGNRIAMIFQEPMTSLNPLHSVEKQINEVL 120

Query: 118 ILHTKASAQERRSLILDMLKRVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLI 177
            LH   + +      L++L  VGI +P   L + PHE SGG RQR+M+A  +  +P LLI
Sbjct: 121 GLHKGLTGKAATERTLELLDLVGIPEPHKRLKALPHELSGGQRQRVMIAMALANEPELLI 180

Query: 178 ADEPTTALDAVIQRDVMELMVELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKG 237
           ADEPTTALD  +Q  ++EL+ +L    G A+LLISHDL +V +  +R+ VM++G IVE+ 
Sbjct: 181 ADEPTTALDVTVQLKILELLKQLQARLGMALLLISHDLNVVRQIANRVCVMQRGCIVEQA 240

Query: 238 RTEDLLKAPQHPYTKKLLSSLPFRGRPRQIDLTSVPMISARDIIVDYAGRKSLFRKNKPK 297
             E+L ++PQHPYTK LLS+ P  G     +    P++   D+ V +  +K L ++    
Sbjct: 241 SCEELFRSPQHPYTKVLLSAEPSGG--PSTNPAGAPLLEIEDLKVWFPIKKGLLKRTVDH 298

Query: 298 -RALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVTESEGRIQFQGRP----RTENW 352
            +A+ G+   + +G+ + +VG SGSGK+TLG  I  L+  S+G I+F+G        +  
Sbjct: 299 VKAVDGIRFSLPQGQTLGIVGESGSGKSTLGLAILRLI-GSQGTIRFKGNALESLSQQQI 357

Query: 353 TDYRLNCQMVFQDPYSSLDPRMTIEALVEEALRPVPGLDGKAKRKRT-LETLEEVGLGVD 411
              R   Q+VFQDP+ SL PRM++  +V E LR + G+   A+++   +E L EVGL  D
Sbjct: 358 RPLRRQMQVVFQDPFGSLSPRMSVAEIVGEGLR-IHGMGTPAEQQTAIIEALREVGLDPD 416

Query: 412 YAGRYPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGF 471
              RYPHE SGGQRQR+AIARA+  +P  ++ DEP SALD TV+ QV++L   LQ +Y  
Sbjct: 417 TRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRSLQTKYNL 476

Query: 472 SCLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPKEAYTRRLLSA 522
           + LFISHDL VV+ ++ +++V++ G+++E+G    IF +P+  YT++LL A
Sbjct: 477 TYLFISHDLAVVKALSHQLMVVKQGQVVEQGAAQDIFAAPQHPYTQQLLEA 527



 Score =  181 bits (460), Expect = 5e-50
 Identities = 112/264 (42%), Positives = 154/264 (58%), Gaps = 18/264 (6%)

Query: 274 MISARDIIVDYAGRKSLFRKNKPKRALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGL 333
           +I  RD+ V++    S       +R +  +S DI  GE +ALVG SGSGK+    +I  L
Sbjct: 6   LIEIRDLAVEFVTGDSR------QRVVENISFDIRRGETLALVGESGSGKSVTAHSILRL 59

Query: 334 V-----TESEGRIQFQG----RPRTENWTDYRLN-CQMVFQDPYSSLDPRMTIEALVEEA 383
           +     +   G I + G    +   +     R N   M+FQ+P +SL+P  ++E  + E 
Sbjct: 60  LPYPIASHPSGTIHYAGEDLLKVEEKKLRTIRGNRIAMIFQEPMTSLNPLHSVEKQINEV 119

Query: 384 LRPVPGLDGKAKRKRTLETLEEVGLGVDYAG--RYPHELSGGQRQRVAIARAIARRPRFL 441
           L    GL GKA  +RTLE L+ VG+   +      PHELSGGQRQRV IA A+A  P  L
Sbjct: 120 LGLHKGLTGKAATERTLELLDLVGIPEPHKRLKALPHELSGGQRQRVMIAMALANEPELL 179

Query: 442 IADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIEE 501
           IADEP +ALDVTV+ ++L+L   LQ R G + L ISHDL VV Q+A+RV VMQ G I+E+
Sbjct: 180 IADEPTTALDVTVQLKILELLKQLQARLGMALLLISHDLNVVRQIANRVCVMQRGCIVEQ 239

Query: 502 GDRDTIFDSPKEAYTRRLLSAIPA 525
              + +F SP+  YT+ LLSA P+
Sbjct: 240 ASCEELFRSPQHPYTKVLLSAEPS 263