Pairwise Alignments

Query, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 622 a.a., ABC transporter ATP-binding protein from Rahnella sp. WP5

 Score =  391 bits (1005), Expect = e-113
 Identities = 228/563 (40%), Positives = 328/563 (58%), Gaps = 54/563 (9%)

Query: 22  QVVKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPPTIKVADGSVSYKGRD-----V 76
           Q +K VSF +  GE+  +VGESGSGK++ + +++ LLP +  V  GS+ + GR+     +
Sbjct: 23  QALKGVSFSINKGEVVAVVGESGSGKSVTSLSVMGLLPDSAHVDAGSIEFFGRNGKCHTL 82

Query: 77  LKMKENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHTKASAQERRSLILDML 136
             +     R LRG E+ ++FQEPMTSLNP + +G QL EGL+ H  A+     +   ++L
Sbjct: 83  TSLSAESRRKLRGQEMSMIFQEPMTSLNPVLRVGDQLTEGLLDHGMANKATALNKARELL 142

Query: 137 KRVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIADEPTTALDAVIQRDVMEL 196
           K+V I D E  L  YPHE SGGMRQR+M+A  +   PALLIADEPTTALD  +Q  ++++
Sbjct: 143 KQVRIPDVERILKCYPHELSGGMRQRVMIAQALACDPALLIADEPTTALDVTVQARILQI 202

Query: 197 MVELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRTEDLLKAPQHPYTKKLLS 256
           + +L +    ++L I+HD+ +VA    R+VVM +G +VE+G   ++    QHPYT+ LL+
Sbjct: 203 LRDLQQGTDMSVLFITHDMGVVAEIADRVVVMYQGQVVEQGSVTEIFANAQHPYTRALLA 262

Query: 257 SLPFRGR------PRQIDL-----------------------------------TSVPMI 275
           ++P  G       PR+  L                                    + P++
Sbjct: 263 AVPKLGDMQGLKWPRRFPLLRDKTGQNISPEKQSVAGDHPHISAGDGDQKTANYDAPPLL 322

Query: 276 SARDIIVDYAGRKS-LFRKNKPKRALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGLV 334
             R + V Y  R   L R  K   A+  +   I  GE +ALVG SG GK+T GR I  LV
Sbjct: 323 DVRGLRVCYPIRSGVLSRVTKEVHAVEQIDFSIWPGETLALVGESGCGKSTTGRAILRLV 382

Query: 335 TESEGRIQFQGRP----RTENWTDYRLNCQMVFQDPYSSLDPRMTIEALVEEALRPVPGL 390
                 I  +G+     R   +   R   QMVFQDPY+SL+PR+T+   + E L  + GL
Sbjct: 383 GSESESIHLEGKEITLMRDTPFQAVRRQIQMVFQDPYASLNPRLTVGFSIAEPLL-LHGL 441

Query: 391 DGKAKRKRTL--ETLEEVGLGVDYAGRYPHELSGGQRQRVAIARAIARRPRFLIADEPVS 448
                    +  + L+ VGL   +A RYPHE SGGQRQR+AIARA+A +P+ +IADE VS
Sbjct: 442 KKSLADATPVVNQLLKSVGLEPFHARRYPHEFSGGQRQRIAIARAMALQPQVIIADEAVS 501

Query: 449 ALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIF 508
           ALDV+++AQV++L  DLQ+  G + LFISHD+ VVE++A+RV VM  G+I+E G RD +F
Sbjct: 502 ALDVSIQAQVVNLMMDLQRDTGVAWLFISHDMAVVERIANRVAVMYSGQIVEIGPRDAVF 561

Query: 509 DSPKEAYTRRLLSAIPALDQNEK 531
            +PK  YT+RLLS++P  D  ++
Sbjct: 562 SNPKHPYTQRLLSSVPVADPTQR 584



 Score =  176 bits (445), Expect = 3e-48
 Identities = 116/285 (40%), Positives = 169/285 (59%), Gaps = 28/285 (9%)

Query: 271 SVPMISARDIIVDYAGRKSLFRKNKPKRALHGVSIDIHEGEVVALVGGSGSGKTTLGRTI 330
           +VP++   D+ V ++GR+         +AL GVS  I++GEVVA+VG SGSGK+    ++
Sbjct: 2   TVPILQINDLSVTFSGRQG------KTQALKGVSFSINKGEVVAVVGESGSGKSVTSLSV 55

Query: 331 AGLVTESE----GRIQFQGRP---------RTENWTDYR-LNCQMVFQDPYSSLDPRMTI 376
            GL+ +S     G I+F GR            E+    R     M+FQ+P +SL+P + +
Sbjct: 56  MGLLPDSAHVDAGSIEFFGRNGKCHTLTSLSAESRRKLRGQEMSMIFQEPMTSLNPVLRV 115

Query: 377 EALVEEALRPVPGLDGKAKR-KRTLETLEEVGL-GVDYAGR-YPHELSGGQRQRVAIARA 433
              + E L    G+  KA    +  E L++V +  V+   + YPHELSGG RQRV IA+A
Sbjct: 116 GDQLTEGLLD-HGMANKATALNKARELLKQVRIPDVERILKCYPHELSGGMRQRVMIAQA 174

Query: 434 IARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVM 493
           +A  P  LIADEP +ALDVTV+A++L +  DLQ+    S LFI+HD+GVV ++ADRVVVM
Sbjct: 175 LACDPALLIADEPTTALDVTVQARILQILRDLQQGTDMSVLFITHDMGVVAEIADRVVVM 234

Query: 494 QDGRIIEEGDRDTIFDSPKEAYTRRLLSAIPALDQNEKGGVTLKW 538
             G+++E+G    IF + +  YTR LL+A+P L   +     LKW
Sbjct: 235 YQGQVVEQGSVTEIFANAQHPYTRALLAAVPKLGDMQ----GLKW 275