Pairwise Alignments

Query, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 536 a.a., oligopeptide/dipeptide ABC transporter, ATP-binding protein from Phaeobacter inhibens DSM 17395

 Score =  421 bits (1082), Expect = e-122
 Identities = 227/524 (43%), Positives = 331/524 (63%), Gaps = 10/524 (1%)

Query: 6   LLTVCGLSLEVARTGQ--QVVKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPPTIK 63
           LL+V  L +   + G+  + V+ VSF +  GE   +VGESGSGK+++  + +SLL  +  
Sbjct: 14  LLSVRDLRVSFRQDGKVTEAVRGVSFSVGRGETVALVGESGSGKSVSALSTVSLLGDSAT 73

Query: 64  VADGSVSYKGRDVLKMKENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHTKA 123
           V+ GSV+Y G +++   E  LR +RG +I  +FQEPMTSLNP  TI +QL E L LH   
Sbjct: 74  VS-GSVTYDGTEMVGASERHLRQVRGNDISFIFQEPMTSLNPLHTIEKQLAESLALHQGL 132

Query: 124 SAQERRSLILDMLKRVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIADEPTT 183
                R  I+D+L RVGIRD E  L +YPH+ SGG RQR+M+A  +  KP +LIADEPTT
Sbjct: 133 GGAAARERIVDLLNRVGIRDAETRLDAYPHQLSGGQRQRVMIAMALANKPDILIADEPTT 192

Query: 184 ALDAVIQRDVMELMVELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRTEDLL 243
           ALD  IQ  +++L+ +L  +EG  +L I+HDL +V R   R+ VM+ G IVE G T ++ 
Sbjct: 193 ALDVTIQVQILDLLADLKASEGMGLLFITHDLSIVRRIADRVCVMQAGEIVESGPTAEIF 252

Query: 244 KAPQHPYTKKLLSSLPFRGRPRQIDLTSVPMISARDIIVDYAGRKSLFRKNKPK-RALHG 302
             PQHPYT+KLL + P  G+P+ +   +  +I   D+ V +  +K   ++     +A++ 
Sbjct: 253 ANPQHPYTRKLLDAEP-TGQPQPVSKDAKELIRTEDLKVWFPIQKGFLKRTVGHVKAVNP 311

Query: 303 VSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVTESEGRIQFQGRP----RTENWTDYRLN 358
            S+ +  GE + +VG SGSGKTTL   I  L+  SEGR++FQG+      T +    R +
Sbjct: 312 TSLSVRAGETLGIVGESGSGKTTLALAIMRLIA-SEGRVEFQGQDLRQWSTRDLRRLRAD 370

Query: 359 CQMVFQDPYSSLDPRMTIEALVEEALRPVPGLDGKAKRKRTLETLEEVGLGVDYAGRYPH 418
            Q+VFQDP+ +L PRMT   ++ E L        +  R    E + EVGL   +  RYPH
Sbjct: 371 MQIVFQDPFGALSPRMTCAQIIAEGLAIHNVDQDRDPRDLVAEVMSEVGLDPAFMDRYPH 430

Query: 419 ELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISH 478
           E SGGQRQR+AIARA+  RP+ ++ DEP SALD+TV+ Q+++L  DLQ+RYG + LFISH
Sbjct: 431 EFSGGQRQRIAIARAMVLRPKLVVLDEPTSALDMTVQVQIVNLLRDLQERYGLAYLFISH 490

Query: 479 DLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPKEAYTRRLLSA 522
           DL VV  ++ +++VM+ G ++E G    +F++P + YT++LL+A
Sbjct: 491 DLNVVRAMSHKMIVMKQGDVVEAGSAAELFNNPSDPYTQQLLAA 534



 Score =  187 bits (475), Expect = 9e-52
 Identities = 113/273 (41%), Positives = 154/273 (56%), Gaps = 16/273 (5%)

Query: 262 GRPRQIDLTSVPMISARDIIVDYAGRKSLFRKNKPKRALHGVSIDIHEGEVVALVGGSGS 321
           G    +     P++S RD+      R S  +  K   A+ GVS  +  GE VALVG SGS
Sbjct: 2   GNSMTVTQKPTPLLSVRDL------RVSFRQDGKVTEAVRGVSFSVGRGETVALVGESGS 55

Query: 322 GKTTLGRTIAGLVTES---EGRIQFQGRPRT----ENWTDYRLN-CQMVFQDPYSSLDPR 373
           GK+    +   L+ +S    G + + G         +    R N    +FQ+P +SL+P 
Sbjct: 56  GKSVSALSTVSLLGDSATVSGSVTYDGTEMVGASERHLRQVRGNDISFIFQEPMTSLNPL 115

Query: 374 MTIEALVEEALRPVPGLDGKAKRKRTLETLEEVGL--GVDYAGRYPHELSGGQRQRVAIA 431
            TIE  + E+L    GL G A R+R ++ L  VG+         YPH+LSGGQRQRV IA
Sbjct: 116 HTIEKQLAESLALHQGLGGAAARERIVDLLNRVGIRDAETRLDAYPHQLSGGQRQRVMIA 175

Query: 432 RAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVV 491
            A+A +P  LIADEP +ALDVT++ Q+LDL +DL+   G   LFI+HDL +V ++ADRV 
Sbjct: 176 MALANKPDILIADEPTTALDVTIQVQILDLLADLKASEGMGLLFITHDLSIVRRIADRVC 235

Query: 492 VMQDGRIIEEGDRDTIFDSPKEAYTRRLLSAIP 524
           VMQ G I+E G    IF +P+  YTR+LL A P
Sbjct: 236 VMQAGEIVESGPTAEIFANPQHPYTRKLLDAEP 268