Pairwise Alignments

Query, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 529 a.a., microcin C ABC transporter ATP-binding protein YejF from Klebsiella michiganensis M5al

 Score =  376 bits (966), Expect = e-108
 Identities = 213/526 (40%), Positives = 320/526 (60%), Gaps = 13/526 (2%)

Query: 6   LLTVCGLSLEVARTGQ--QVVKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLP-PTI 62
           LL +  LS+   + G+   VV  +S  +A GE   +VGESGSGK++   +++ LLP P +
Sbjct: 5   LLDIDNLSIAFRQQGETTSVVSELSLQIAVGETLALVGESGSGKSVTALSVLRLLPSPPV 64

Query: 63  KVADGSVSYKGRDVLKMKENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHTK 122
               G + + G+ +L   E  LR +RG  I ++FQEPM SLNP  T+ +QL E L LH  
Sbjct: 65  SYPTGDIRFHGQSLLHADERTLRGVRGNRIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRG 124

Query: 123 ASAQERRSLILDMLKRVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIADEPT 182
              +  R  ILD L+RVGIR+    L+ YPH+ SGG RQR+M+A  +L +P LLIADEPT
Sbjct: 125 MRKEAARGEILDCLERVGIRNAPRRLADYPHQLSGGERQRVMIAMALLTRPELLIADEPT 184

Query: 183 TALDAVIQRDVMELMVELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRTEDL 242
           TALD  +Q  ++ L+ EL +     +L I+H+L +V +   R+ VM+ G  VE+   + L
Sbjct: 185 TALDVSVQAQILTLLRELKQELNMGLLFITHNLSIVRQLADRVAVMQNGRCVEQNGCQAL 244

Query: 243 LKAPQHPYTKKLLSSLPFRGRPRQIDLTSVPMISARDIIVDYAGRKSLFRK-NKPKRALH 301
             AP+HPYT++LL S P  G P  +   +  ++ A ++ + +  RK L R+     R ++
Sbjct: 245 FFAPEHPYTRRLLDSEP-SGDPVPLAPDAPVLLRAENLSIAFPIRKGLLRRVVDHNRVVN 303

Query: 302 GVSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVTESEGRIQF-----QGRPRTENWTDYR 356
            VS  +  GE + LVG SGSGK+T G  +  L+  S G I F     QGR R +     R
Sbjct: 304 AVSFHLRAGETLGLVGESGSGKSTTGLALLRLI-HSAGAIAFDGEALQGRNR-QQMLPLR 361

Query: 357 LNCQMVFQDPYSSLDPRMTIEALVEEALR-PVPGLDGKAKRKRTLETLEEVGLGVDYAGR 415
              Q+VFQDP SSL+PR+ +  ++EE LR   P L    + +  ++ ++EVGL      R
Sbjct: 362 RRMQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLTPAEREQAVIQAMQEVGLDPQSRHR 421

Query: 416 YPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLF 475
           YP   SGGQRQR+AIARA+  +P+ ++ DEP S+LD TV+AQ+L L   LQ+++  + +F
Sbjct: 422 YPAAFSGGQRQRIAIARALVVKPQLIVLDEPTSSLDKTVQAQILALLKTLQQKHQLAYIF 481

Query: 476 ISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPKEAYTRRLLS 521
           ISHDL VV  +  +V+V++ G ++E+G+ + +F +P++ YTR+LL+
Sbjct: 482 ISHDLRVVRALCHQVMVLRQGEVVEQGECERVFTAPQQEYTRQLLA 527



 Score =  161 bits (408), Expect = 5e-44
 Identities = 99/239 (41%), Positives = 139/239 (58%), Gaps = 16/239 (6%)

Query: 303 VSIDIHEGEVVALVGGSGSGKTTLGRTIAGL-----VTESEGRIQFQGRPRTENWTDYRL 357
           +S+ I  GE +ALVG SGSGK+    ++  L     V+   G I+F G+       D R 
Sbjct: 28  LSLQIAVGETLALVGESGSGKSVTALSVLRLLPSPPVSYPTGDIRFHGQSLLH--ADERT 85

Query: 358 -------NCQMVFQDPYSSLDPRMTIEALVEEALRPVPGLDGKAKRKRTLETLEEVGL-- 408
                     M+FQ+P  SL+P  T+E  + E L    G+  +A R   L+ LE VG+  
Sbjct: 86  LRGVRGNRIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRKEAARGEILDCLERVGIRN 145

Query: 409 GVDYAGRYPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKR 468
                  YPH+LSGG+RQRV IA A+  RP  LIADEP +ALDV+V+AQ+L L  +L++ 
Sbjct: 146 APRRLADYPHQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILTLLRELKQE 205

Query: 469 YGFSCLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPKEAYTRRLLSAIPALD 527
                LFI+H+L +V Q+ADRV VMQ+GR +E+     +F +P+  YTRRLL + P+ D
Sbjct: 206 LNMGLLFITHNLSIVRQLADRVAVMQNGRCVEQNGCQALFFAPEHPYTRRLLDSEPSGD 264