Pairwise Alignments
Query, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021
Subject, 529 a.a., ABC transporter from Herbaspirillum seropedicae SmR1
Score = 404 bits (1037), Expect = e-117
Identities = 228/523 (43%), Positives = 323/523 (61%), Gaps = 12/523 (2%)
Query: 6 LLTVCGLSLEVARTGQQVVKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPPTIKVA 65
LL V L++ T VV VSF +APGE F +VGESGSGKT+++ A++ L
Sbjct: 5 LLEVNNLTVRFGDT--VVVDRVSFAIAPGEKFALVGESGSGKTVSSLAVMQLNQDARY-- 60
Query: 66 DGSVSYKGRDVLKMKENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHTKASA 125
+GS+ G+DVL E +++ +RG ++ ++FQEPMT+LNP TIG Q+ E L+ H +A
Sbjct: 61 EGSILLDGQDVLAKSERQMQQVRGNDVAMIFQEPMTALNPLFTIGNQIAEVLMHHEGLNA 120
Query: 126 QERRSLILDMLKRVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIADEPTTAL 185
++ + +L++ GI +P SYPHE SGG RQR M+A + KP LLIADEPTTAL
Sbjct: 121 RDAARRAVALLEKTGIPEPARRALSYPHELSGGQRQRAMIAMALACKPKLLIADEPTTAL 180
Query: 186 DAVIQRDVMELMVELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRTEDLLKA 245
D IQ ++ L+ +L R E A+L+ISHDL +V + R+ VMEKG +VE +L
Sbjct: 181 DVTIQVQILALLNQLQREENMAVLIISHDLNLVRHFADRVGVMEKGKLVESASVAELFAN 240
Query: 246 PQHPYTKKLLSSLPFRGRPRQIDLTSVPMISARDIIVDYAGRKSLFRKNKPKRALHGVSI 305
PQ PYT+KLL S P R + + ++ A + Y ++ F K + A+ GV +
Sbjct: 241 PQQPYTRKLLQSRPQR-NAADVAADAPVVLQAERLRCTYHIKQGWFAK-RAFHAVDGVDL 298
Query: 306 DIHEGEVVALVGGSGSGKTTLGRTIAGLVTES-EGRIQFQGRPRTE----NWTDYRLNCQ 360
+ GE + +VG SGSGK+TLG + L S G I+F G P +E R Q
Sbjct: 299 QLRRGETLGIVGESGSGKSTLGMALLRLSAASVAGSIRFDGVPISERPQRELRPLRSRMQ 358
Query: 361 MVFQDPYSSLDPRMTIEALVEEALR-PVPGLDGKAKRKRTLETLEEVGLGVDYAGRYPHE 419
+VFQDP++SL PR T+E +V E L P + +R+ + LEEVGL RYPHE
Sbjct: 359 VVFQDPFASLSPRRTVEQIVGEGLELHHPDRSAEQQRQAIVAALEEVGLSAAVLERYPHE 418
Query: 420 LSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHD 479
SGGQRQR+AIARA+ +P L+ DEP SALDVTV+ QVL L ++LQ+R+G + LFI+HD
Sbjct: 419 FSGGQRQRIAIARALVLQPELLLLDEPTSALDVTVQQQVLQLLAELQRRHGLAYLFITHD 478
Query: 480 LGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPKEAYTRRLLSA 522
L VV+ +A +V+VM+DG+++E G + P++ YTRRL++A
Sbjct: 479 LAVVQAMAHQVIVMKDGKVVESGATAQVLQQPQQEYTRRLVAA 521
Score = 179 bits (454), Expect = 2e-49
Identities = 100/245 (40%), Positives = 149/245 (60%), Gaps = 7/245 (2%)
Query: 17 ARTGQQVVKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPPTIKVADGSVSYKGRDV 76
A+ V V L GE GIVGESGSGK+ AL+ L ++ GS+ + G +
Sbjct: 286 AKRAFHAVDGVDLQLRRGETLGIVGESGSGKSTLGMALLRLSAASVA---GSIRFDGVPI 342
Query: 77 LKMKENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILH-TKASAQERRSLILDM 135
+ + ELR LR + + VVFQ+P SL+P T+ + + EGL LH SA+++R I+
Sbjct: 343 SERPQRELRPLR-SRMQVVFQDPFASLSPRRTVEQIVGEGLELHHPDRSAEQQRQAIVAA 401
Query: 136 LKRVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIADEPTTALDAVIQRDVME 195
L+ VG+ L YPHEFSGG RQRI +A ++L+P LL+ DEPT+ALD +Q+ V++
Sbjct: 402 LEEVGLS--AAVLERYPHEFSGGQRQRIAIARALVLQPELLLLDEPTSALDVTVQQQVLQ 459
Query: 196 LMVELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRTEDLLKAPQHPYTKKLL 255
L+ EL R G A L I+HDL +V +++VM+ G +VE G T +L+ PQ YT++L+
Sbjct: 460 LLAELQRRHGLAYLFITHDLAVVQAMAHQVIVMKDGKVVESGATAQVLQQPQQEYTRRLV 519
Query: 256 SSLPF 260
++ +
Sbjct: 520 AAATY 524
Score = 154 bits (390), Expect = 6e-42
Identities = 95/231 (41%), Positives = 132/231 (57%), Gaps = 9/231 (3%)
Query: 303 VSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVTES--EGRIQFQGRP----RTENWTDYR 356
VS I GE ALVG SGSGKT + L ++ EG I G+ R
Sbjct: 24 VSFAIAPGEKFALVGESGSGKTVSSLAVMQLNQDARYEGSILLDGQDVLAKSERQMQQVR 83
Query: 357 LN-CQMVFQDPYSSLDPRMTIEALVEEALRPVPGLDGKAKRKRTLETLEEVGLG--VDYA 413
N M+FQ+P ++L+P TI + E L GL+ + +R + LE+ G+ A
Sbjct: 84 GNDVAMIFQEPMTALNPLFTIGNQIAEVLMHHEGLNARDAARRAVALLEKTGIPEPARRA 143
Query: 414 GRYPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGFSC 473
YPHELSGGQRQR IA A+A +P+ LIADEP +ALDVT++ Q+L L + LQ+ +
Sbjct: 144 LSYPHELSGGQRQRAMIAMALACKPKLLIADEPTTALDVTIQVQILALLNQLQREENMAV 203
Query: 474 LFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPKEAYTRRLLSAIP 524
L ISHDL +V ADRV VM+ G+++E +F +P++ YTR+LL + P
Sbjct: 204 LIISHDLNLVRHFADRVGVMEKGKLVESASVAELFANPQQPYTRKLLQSRP 254