Pairwise Alignments

Query, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 533 a.a., ABC transporter related (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  419 bits (1076), Expect = e-121
 Identities = 230/529 (43%), Positives = 342/529 (64%), Gaps = 16/529 (3%)

Query: 4   DKLLTVCGLSLEVARTGQ--QVVKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPPT 61
           D +L V  L +   + GQ  + VK VSFD+A GE   +VGESGSGK++   + +SLLP +
Sbjct: 3   DAVLQVRNLRVGFRQDGQVTEAVKGVSFDVAQGETVALVGESGSGKSVTALSTVSLLPDS 62

Query: 62  IKVADGSVSYKGRDVLKMKENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHT 121
            +V+ GS++Y G +++   E +LR +RG ++  +FQEPMTSLNP   + +Q+ E L LH 
Sbjct: 63  AEVS-GSITYAGTEMVGAPERDLRRVRGNDVSFIFQEPMTSLNPLHPLEKQITESLTLHQ 121

Query: 122 KASAQERRSLILDMLKRVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIADEP 181
             +    R+ ++++L++VGIRD E  L +YPH+ SGG RQR+M+A  +   P LLIADEP
Sbjct: 122 GLTGDAARARVIELLEKVGIRDAESRLGAYPHQLSGGQRQRVMIAMALANGPDLLIADEP 181

Query: 182 TTALDAVIQRDVMELMVELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRTED 241
           TTALD  IQ  +++L+ +L  AEG ++L I+HDL +V R   R+ VM+ G IVE G T +
Sbjct: 182 TTALDVTIQAQILDLLADLKEAEGMSLLFITHDLTIVRRIADRVCVMQGGEIVETGPTAE 241

Query: 242 LLKAPQHPYTKKLLSSLPFRGRPRQIDLTSVPMISARDII-VDYAGRKSLFRKNKPK-RA 299
           +   PQHPYT+KLL++ P  G+P  +     P+++  D + V +  ++ + R+     +A
Sbjct: 242 IFANPQHPYTRKLLAAEP-SGQPDPVP-EDAPVVAETDSLKVWFPIQRGILRRTVGHVKA 299

Query: 300 LHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVTESEGRIQFQGRPRTENWTD----- 354
           ++  ++++  GE + +VG SGSGKTTL   I  L++ SEGRI + G    + W       
Sbjct: 300 VNNATLNVRAGETLGVVGESGSGKTTLALAILRLIS-SEGRIVYAGE-NIQGWKSRDLRR 357

Query: 355 YRLNCQMVFQDPYSSLDPRMTIEALVEEALRPVPGLD-GKAKRKRTLETLEEVGLGVDYA 413
            R + Q+VFQDPY SL PRMTI  ++ E L  V GL+ G   R+   E L EVGL     
Sbjct: 358 LRKDMQVVFQDPYGSLSPRMTIAQIIAEGL-GVHGLEPGADPRRMVAEILVEVGLDPAMM 416

Query: 414 GRYPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGFSC 473
            RYPHE SGGQRQR+AIARA+  RP+ ++ DEP SALD+TV+ Q+++L   LQ++YG + 
Sbjct: 417 DRYPHEFSGGQRQRIAIARAMILRPKLVVLDEPTSALDMTVQVQIVELLRALQRKYGLAY 476

Query: 474 LFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPKEAYTRRLLSA 522
           +FISHDL VV  ++ +V+VM+ G ++E G+   IF+ P+  YT++LL+A
Sbjct: 477 IFISHDLKVVRALSHKVIVMRQGDVVEMGEGRQIFERPRSDYTKQLLAA 525



 Score =  191 bits (484), Expect = 8e-53
 Identities = 109/237 (45%), Positives = 148/237 (62%), Gaps = 10/237 (4%)

Query: 299 ALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVTES---EGRIQFQGR-----PRTE 350
           A+ GVS D+ +GE VALVG SGSGK+    +   L+ +S    G I + G      P  +
Sbjct: 24  AVKGVSFDVAQGETVALVGESGSGKSVTALSTVSLLPDSAEVSGSITYAGTEMVGAPERD 83

Query: 351 NWTDYRLNCQMVFQDPYSSLDPRMTIEALVEEALRPVPGLDGKAKRKRTLETLEEVGL-- 408
                  +   +FQ+P +SL+P   +E  + E+L    GL G A R R +E LE+VG+  
Sbjct: 84  LRRVRGNDVSFIFQEPMTSLNPLHPLEKQITESLTLHQGLTGDAARARVIELLEKVGIRD 143

Query: 409 GVDYAGRYPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKR 468
                G YPH+LSGGQRQRV IA A+A  P  LIADEP +ALDVT++AQ+LDL +DL++ 
Sbjct: 144 AESRLGAYPHQLSGGQRQRVMIAMALANGPDLLIADEPTTALDVTIQAQILDLLADLKEA 203

Query: 469 YGFSCLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPKEAYTRRLLSAIPA 525
            G S LFI+HDL +V ++ADRV VMQ G I+E G    IF +P+  YTR+LL+A P+
Sbjct: 204 EGMSLLFITHDLTIVRRIADRVCVMQGGEIVETGPTAEIFANPQHPYTRKLLAAEPS 260