Pairwise Alignments

Query, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 629 a.a., dipeptide ABC transporter ATP-binding protein from Ralstonia sp. UNC404CL21Col

 Score =  388 bits (996), Expect = e-112
 Identities = 227/566 (40%), Positives = 336/566 (59%), Gaps = 39/566 (6%)

Query: 1   MTMDKLLTVCGLSLEVARTGQQV--VKSVSFDLAPGEIFGIVGESGSGKTLATRALISLL 58
           M   +++ V  LS+  A + + V  V+++SF +  GE   +VGESGSGK++ + AL+ L+
Sbjct: 15  MPDQRVVQVQDLSVRFATSERVVDAVRNLSFHVDRGETLAVVGESGSGKSVTSLALMRLV 74

Query: 59  PPTI-KVADGSVSYKGR-----DVLKMKENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQ 112
                K+  G +  + R     D+       +R +RGA+I ++FQEPMTSLNP  T+G Q
Sbjct: 75  EHGGGKIIGGQMHLRRRNGEVLDLANASPAAMRGVRGADIAMIFQEPMTSLNPVFTVGEQ 134

Query: 113 LEEGLILHTKASAQERRSLILDMLKRVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLK 172
           + E + LH    A E ++  L ML+ V I +    L  YPH+ SGGMRQR+M+A  +  K
Sbjct: 135 IAESIRLHQGKPASEAKAEALRMLELVRIPEARNVLGRYPHQLSGGMRQRVMIAMALSCK 194

Query: 173 PALLIADEPTTALDAVIQRDVMELMVELTRAEGTAILLISHDLPMVARYTSRIVVMEKGA 232
           P+LLIADEPTTALD  IQ ++++L+  L +    A++ I+HD+ +VA    R++VM KG 
Sbjct: 195 PSLLIADEPTTALDVTIQAEILQLIRALQQELHMAVVFITHDMGVVAEVADRVLVMYKGD 254

Query: 233 IVEKGRTEDLLKAPQHPYTKKLLSSLPFRGR------PRQIDLTSV-------------- 272
            VE+G +  +   P HPYT+ LLS++P  G       P +  L  V              
Sbjct: 255 RVEEGPSATVFAQPAHPYTRALLSAVPRLGSMQGTDGPARFPLLRVDGTAAAVDTTPQPA 314

Query: 273 ------PMISARDIIVDYAGRKSLF-RKNKPKRALHGVSIDIHEGEVVALVGGSGSGKTT 325
                 P++  RD++  +     +F R  +   A+  VS D++ GE +ALVG SG GK+T
Sbjct: 315 ASHDVQPILRVRDLVTRFDVPTGIFGRVTRRVHAVEQVSFDLYPGETLALVGESGCGKST 374

Query: 326 LGRTIAGLVTESEGRIQFQGRPRTE----NWTDYRLNCQMVFQDPYSSLDPRMTIEALVE 381
            GR++  LV    G I+F G+   E         R N Q +FQDP++SLDPR+ +   + 
Sbjct: 375 TGRSLLRLVDSQSGSIEFAGQNIGELKGPALQTLRRNIQFIFQDPFASLDPRVPVGYSIM 434

Query: 382 EALRPVPGLDGKAKRKRTLETLEEVGLGVDYAGRYPHELSGGQRQRVAIARAIARRPRFL 441
           E L       GK  ++R    L++VGL   +A RYPHE SGGQRQR+ IARA+A  P+ +
Sbjct: 435 EPLLVHKVASGKEAQQRVEWLLDKVGLQAAHASRYPHEFSGGQRQRICIARALALNPKVV 494

Query: 442 IADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIEE 501
           IADE VSALDV+++AQ+++L  DLQK +G + LFISHD+ VVE+++ RV VM  G+I+E 
Sbjct: 495 IADESVSALDVSIQAQIVNLMLDLQKEFGVAFLFISHDMAVVERISHRVAVMYLGQIVEI 554

Query: 502 GDRDTIFDSPKEAYTRRLLSAIPALD 527
           G R  IF++P+  YT++L+SA+P  D
Sbjct: 555 GPRRAIFENPQHPYTKKLMSAVPIAD 580



 Score =  182 bits (463), Expect = 3e-50
 Identities = 100/243 (41%), Positives = 149/243 (61%), Gaps = 7/243 (2%)

Query: 24  VKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPPTIKVADGSVSYKGRDVLKMKENE 83
           V+ VSFDL PGE   +VGESG GK+   R+L+ L    +    GS+ + G+++ ++K   
Sbjct: 349 VEQVSFDLYPGETLALVGESGCGKSTTGRSLLRL----VDSQSGSIEFAGQNIGELKGPA 404

Query: 84  LRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHTKASAQERRSLILDMLKRVGIRD 143
           L+ LR   I  +FQ+P  SL+P + +G  + E L++H  AS +E +  +  +L +VG++ 
Sbjct: 405 LQTLR-RNIQFIFQDPFASLDPRVPVGYSIMEPLLVHKVASGKEAQQRVEWLLDKVGLQA 463

Query: 144 PEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIADEPTTALDAVIQRDVMELMVELTRA 203
                S YPHEFSGG RQRI +A  + L P ++IADE  +ALD  IQ  ++ LM++L + 
Sbjct: 464 AHA--SRYPHEFSGGQRQRICIARALALNPKVVIADESVSALDVSIQAQIVNLMLDLQKE 521

Query: 204 EGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRTEDLLKAPQHPYTKKLLSSLPFRGR 263
            G A L ISHD+ +V R + R+ VM  G IVE G    + + PQHPYTKKL+S++P    
Sbjct: 522 FGVAFLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAIFENPQHPYTKKLMSAVPIADP 581

Query: 264 PRQ 266
            R+
Sbjct: 582 ARR 584