Pairwise Alignments

Query, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 580 a.a., peptide/nickel transport system ATP-binding protein from Paraburkholderia graminis OAS925

 Score =  389 bits (998), Expect = e-112
 Identities = 233/566 (41%), Positives = 322/566 (56%), Gaps = 52/566 (9%)

Query: 4   DKLLTVCGLSLEVARTGQQVVKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPPTIK 63
           D LL V    L V+    + V+ + F++A GE   +VGESG GK+    +L+ L+P   +
Sbjct: 12  DNLLEV--RDLRVSFGAHEAVRGIGFEVARGETLALVGESGCGKSATALSLMRLVPSPGR 69

Query: 64  VADGSVSYKGRDVLKMKENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHTKA 123
           V+ GSV + GRD+L +  +E+R +RG +I ++FQEPMTSLNP ++IG Q+ E L  H   
Sbjct: 70  VS-GSVRFDGRDLLDLSASEIRAVRGQQISMIFQEPMTSLNPVLSIGAQIVETLRQHENL 128

Query: 124 SAQERRSLILDMLKRVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIADEPTT 183
           S        +++L  V I +P+  +  YPHE SGG RQR+M+A  +  +P LLIADEPTT
Sbjct: 129 SKTAAWKRAVELLDLVRIPEPQRRVFDYPHELSGGQRQRVMIAMAVACRPRLLIADEPTT 188

Query: 184 ALDAVIQRDVMELMVELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRTEDLL 243
           ALD  IQ  ++EL+  L R    ++LLI+HDL +VA++  R+ VM  G +VE+  T  L 
Sbjct: 189 ALDVTIQARILELLDGLKRELSMSLLLITHDLGVVAQHADRVAVMLAGRVVEQAATSQLF 248

Query: 244 KAPQHPYTKKLLSS-------LPFRG-------------------------------RPR 265
             P+H YT+ LL +       L +RG                                 R
Sbjct: 249 ARPEHAYTRGLLGASLNLVDDLHYRGWKLPEIRHVRSDDGSAAFSVIPRAPYSSEDDARR 308

Query: 266 QID---LTSVPMISARDIIVDYAGRKSLFRKNKPKRALHGVSIDIHEGEVVALVGGSGSG 322
           + D       P++S  D+ +DY  R          RA+ GVS+ I  GE V LVG SG G
Sbjct: 309 EADNAASVDAPLLSLHDVRIDYPQRHG----KTMLRAVDGVSLQIAPGETVGLVGESGCG 364

Query: 323 KTTLGRTIAGLVTESEGRIQFQGRP----RTENWTDYRLNCQMVFQDPYSSLDPRMTIEA 378
           K+TL + I  LV  S G+I+ +G      R       R + QMVFQDPY+SL+PR T+  
Sbjct: 365 KSTLSKAILRLVPASGGQIRLRGTDLVPLRERELRPLRRHVQMVFQDPYASLNPRRTVGE 424

Query: 379 LVEEALRPVPGLDGKAKRKRTLETLEEVGLGVDYAGRYPHELSGGQRQRVAIARAIARRP 438
           +++  L      D + +R R    L+ VGL      R+PHE SGGQRQR+ IARA+   P
Sbjct: 425 ILDTVLVVNGVSDARRRRTRIAAILDRVGLPGSAQQRFPHEFSGGQRQRIGIARALVLEP 484

Query: 439 RFLIADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRI 498
             LI DEPVSALDV+++AQVL+L  DL++  G + LFISHDL VV  +ADRV VMQ GRI
Sbjct: 485 DLLICDEPVSALDVSIQAQVLNLLVDLKRDLGLAYLFISHDLSVVRYIADRVHVMQAGRI 544

Query: 499 IEEGDRDTIFDSPKEAYTRRLLSAIP 524
           +E GD   I+ +P+  YTR LL A+P
Sbjct: 545 VESGDHREIWRAPQHPYTRTLLDAVP 570



 Score =  199 bits (506), Expect = 2e-55
 Identities = 108/244 (44%), Positives = 156/244 (63%), Gaps = 7/244 (2%)

Query: 18  RTGQQVVKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPPTIKVADGSVSYKGRDVL 77
           +T  + V  VS  +APGE  G+VGESG GK+  ++A++ L+P     + G +  +G D++
Sbjct: 336 KTMLRAVDGVSLQIAPGETVGLVGESGCGKSTLSKAILRLVP----ASGGQIRLRGTDLV 391

Query: 78  KMKENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHTKASAQERRSLILDMLK 137
            ++E ELR LR   + +VFQ+P  SLNP  T+G  L+  L+++  + A+ RR+ I  +L 
Sbjct: 392 PLRERELRPLR-RHVQMVFQDPYASLNPRRTVGEILDTVLVVNGVSDARRRRTRIAAILD 450

Query: 138 RVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIADEPTTALDAVIQRDVMELM 197
           RVG+  P  A   +PHEFSGG RQRI +A  ++L+P LLI DEP +ALD  IQ  V+ L+
Sbjct: 451 RVGL--PGSAQQRFPHEFSGGQRQRIGIARALVLEPDLLICDEPVSALDVSIQAQVLNLL 508

Query: 198 VELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRTEDLLKAPQHPYTKKLLSS 257
           V+L R  G A L ISHDL +V     R+ VM+ G IVE G   ++ +APQHPYT+ LL +
Sbjct: 509 VDLKRDLGLAYLFISHDLSVVRYIADRVHVMQAGRIVESGDHREIWRAPQHPYTRTLLDA 568

Query: 258 LPFR 261
           +P R
Sbjct: 569 VPGR 572