Pairwise Alignments
Query, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021
Subject, 544 a.a., ABC transporter from Burkholderia phytofirmans PsJN
Score = 421 bits (1081), Expect = e-122
Identities = 233/517 (45%), Positives = 326/517 (63%), Gaps = 19/517 (3%)
Query: 24 VKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPPTIKVADGSVSYKGRDVLKMKENE 83
V V+ + GE +VGESGSGK++ +++ LL GS+ + G D+L E E
Sbjct: 33 VSDVTLAIQRGERVALVGESGSGKSVTALSILRLLSDA--QVSGSIRFDGEDLLGKTERE 90
Query: 84 LRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHTKASAQERRSLILDMLKRVGIRD 143
+R +RG++I ++FQEPMT+LNP T+G Q+ E +++H SA E R + +L R GI +
Sbjct: 91 MRGMRGSDIAMIFQEPMTALNPLYTVGDQIAETIVVHDGVSANEARKRAVALLGRTGIAE 150
Query: 144 PEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIADEPTTALDAVIQRDVMELMVELTRA 203
P ++SYPH+ SGG RQR M+A + +P LL+ADEPTTALD I+ +++L++EL R
Sbjct: 151 PGKRVNSYPHQLSGGQRQRAMIAMALACRPRLLLADEPTTALDVTIRAQIVDLLLELQRD 210
Query: 204 E----GTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRTEDLLKAPQHPYTKKLLSSLP 259
E G A+LLI+HDL +V + RI VMEKG +VE G E + ++PQHPYT++LL+S P
Sbjct: 211 EAEKRGMAVLLITHDLNLVRHFAQRIAVMEKGVLVESGPVEQVFESPQHPYTQRLLASRP 270
Query: 260 FRGRPRQIDLTSVPMISARDIIVDYA----GRKSLFRKNKPKRALHGVSIDIHEGEVVAL 315
R + ++ V ++ AR+I VD+ G FR + RA+ ++ + +GE + +
Sbjct: 271 QRTVVPVLPISPV-LLEAREISVDFKTKLPGFSGWFRSGR-FRAVADANVSVRQGETLGI 328
Query: 316 VGGSGSGKTTLGRTIAGLVTESEGRIQFQGRP----RTENWTDYRLNCQMVFQDPYSSLD 371
VG SGSGK+TL + GL G I+FQGR R T R N Q+VFQDP+SSL
Sbjct: 329 VGESGSGKSTLAMALLGLQRTVHGEIEFQGRALGSYRGAEQTALRSNMQVVFQDPFSSLS 388
Query: 372 PRMTIEALVEEALR-PVPGLDGKAKRKRTLETLEEVGLGVDYAGRYPHELSGGQRQRVAI 430
PR TIE +V E L P + +A+R + + L EVGL RYPHE SGGQRQR+AI
Sbjct: 389 PRQTIERIVGEGLALHRPAMTPQARRDKVISVLREVGLDRTVLQRYPHEFSGGQRQRIAI 448
Query: 431 ARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRV 490
ARA+ PR LI DEP SALDV+++ QVL L + LQ++Y +FISHDL V+ +A RV
Sbjct: 449 ARALVLEPRILILDEPTSALDVSIQQQVLKLLAGLQQKYNLGFVFISHDLAVIGAMAHRV 508
Query: 491 VVMQDGRIIEEGDRDTIFDSPKEAYTRRLLSAIPALD 527
VMQ+G I+E G+ + IF +P YTR+LL A ALD
Sbjct: 509 AVMQNGSIVESGEVEEIFSTPAHPYTRKLLKA--ALD 543
Score = 176 bits (446), Expect = 2e-48
Identities = 99/242 (40%), Positives = 145/242 (59%), Gaps = 9/242 (3%)
Query: 18 RTGQ-QVVKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPPTIKVADGSVSYKGRDV 76
R+G+ + V + + GE GIVGESGSGK+ AL+ L + G + ++GR +
Sbjct: 306 RSGRFRAVADANVSVRQGETLGIVGESGSGKSTLAMALLGLQ----RTVHGEIEFQGRAL 361
Query: 77 LKMKENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHTKA-SAQERRSLILDM 135
+ E LR + + VVFQ+P +SL+P TI R + EGL LH A + Q RR ++ +
Sbjct: 362 GSYRGAEQTALR-SNMQVVFQDPFSSLSPRQTIERIVGEGLALHRPAMTPQARRDKVISV 420
Query: 136 LKRVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIADEPTTALDAVIQRDVME 195
L+ VG+ L YPHEFSGG RQRI +A ++L+P +LI DEPT+ALD IQ+ V++
Sbjct: 421 LREVGL--DRTVLQRYPHEFSGGQRQRIAIARALVLEPRILILDEPTSALDVSIQQQVLK 478
Query: 196 LMVELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRTEDLLKAPQHPYTKKLL 255
L+ L + + ISHDL ++ R+ VM+ G+IVE G E++ P HPYT+KLL
Sbjct: 479 LLAGLQQKYNLGFVFISHDLAVIGAMAHRVAVMQNGSIVESGEVEEIFSTPAHPYTRKLL 538
Query: 256 SS 257
+
Sbjct: 539 KA 540
Score = 162 bits (409), Expect = 4e-44
Identities = 94/239 (39%), Positives = 142/239 (59%), Gaps = 13/239 (5%)
Query: 299 ALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVTESE--GRIQFQ-----GRPRTEN 351
A+ V++ I GE VALVG SGSGK+ +I L+++++ G I+F G+ E
Sbjct: 32 AVSDVTLAIQRGERVALVGESGSGKSVTALSILRLLSDAQVSGSIRFDGEDLLGKTEREM 91
Query: 352 WTDYRLNCQMVFQDPYSSLDPRMTIEALVEEALRPVPGLDGKAKRKRTLETLEEVGLGV- 410
+ M+FQ+P ++L+P T+ + E + G+ RKR + L G+
Sbjct: 92 RGMRGSDIAMIFQEPMTALNPLYTVGDQIAETIVVHDGVSANEARKRAVALLGRTGIAEP 151
Query: 411 -DYAGRYPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQK-- 467
YPH+LSGGQRQR IA A+A RPR L+ADEP +ALDVT+RAQ++DL +LQ+
Sbjct: 152 GKRVNSYPHQLSGGQRQRAMIAMALACRPRLLLADEPTTALDVTIRAQIVDLLLELQRDE 211
Query: 468 --RYGFSCLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPKEAYTRRLLSAIP 524
+ G + L I+HDL +V A R+ VM+ G ++E G + +F+SP+ YT+RLL++ P
Sbjct: 212 AEKRGMAVLLITHDLNLVRHFAQRIAVMEKGVLVESGPVEQVFESPQHPYTQRLLASRP 270