Pairwise Alignments

Query, 276 a.a., transposase ISRM1 from Sinorhizobium meliloti 1021

Subject, 280 a.a., ISDvu2, transposase OrfB (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  276 bits (705), Expect = 5e-79
 Identities = 142/273 (52%), Positives = 183/273 (67%), Gaps = 6/273 (2%)

Query: 1   MKSVCETLGVARSNIAARAAGSPSRARGRP---PLPDRELVEDIKAVIADMPTYGYRRVH 57
           MK V ++L V+RS +A R  G P R R +P      D EL+  I+A++ +  TYGYRR+ 
Sbjct: 1   MKRVADSLQVSRSRLAERLDG-PHRTR-KPRYVKAQDEELLRLIRAILDERQTYGYRRIQ 58

Query: 58  AILRRNARKLGRSWPNAKRVYRVMKLHNLLLVRHTGAVDNRLHEGQVAVERSNIRWCSDG 117
           A L  + R  G+S  N KRVYR+M+++ LLL RH G   ++ HEG++     N RWCSDG
Sbjct: 59  ACLNAHLRATGQSEVNHKRVYRIMRMNGLLLTRHNGKRPDKAHEGKIVTLHRNTRWCSDG 118

Query: 118 FEIGCDNKEKVRVAFALDCCDREAIAHVATTEGIKSQDVQDLVITAVENRFGRINMLSEP 177
           FEI CDN+E VRVAF LD CDRE I++VATT GI    V+DL++ +VE RFG  +  S  
Sbjct: 119 FEIPCDNREVVRVAFVLDSCDREVISYVATTRGISGSMVRDLMLESVERRFGNAH-TSHT 177

Query: 178 IEWLTDNGSCFIAKDTASLLRDIGMEPCTTPVRSPQSNGMAEAFVKTFKRDYVAVNPTPD 237
           +EWL+DNGSC+ AK+T      +G+  C TPVRSP+SNGMAEAFVKTFKRDYV  N  PD
Sbjct: 178 VEWLSDNGSCYTAKETVEFASWLGLRSCFTPVRSPESNGMAEAFVKTFKRDYVDCNICPD 237

Query: 238 AETVMAQLPFWFEHYNNLHPHSALGYQSPREFI 270
           A +V+ +L  WFE YN   PH  L  +SPR+FI
Sbjct: 238 APSVLKRLSEWFEDYNENAPHKGLRMRSPRQFI 270