Pairwise Alignments

Query, 276 a.a., transposase ISRM1 from Sinorhizobium meliloti 1021

Subject, 274 a.a., ISD1, transposase OrfB (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 55.5 bits (132), Expect = 1e-12
 Identities = 60/245 (24%), Positives = 94/245 (38%), Gaps = 14/245 (5%)

Query: 31  PLPDRELVEDIKAVIADMPTYGYRRVHAILRRNARKLGRSWPNAKRVYRVMKLHNLLLVR 90
           P  D  ++E +  +    P YG+ ++ A+LRR+    G  W N KRVYRV  L  + L R
Sbjct: 33  PRDDSLIIEALLGLADRYPRYGFGKLFAVLRRH----GFRW-NHKRVYRVYCLLKMNLRR 87

Query: 91  H-TGAVDNRLHEGQVAVERSNIRWCSDGFEIGCDNKEKVRVAFALDCCDREAIAHVATTE 149
                + +R  +       +N+ W  D       + ++ R    LD   RE +A    T 
Sbjct: 88  KGKKRLPSRNPQPLAVPPCANVCWSIDFMHDALASGQRFRTFNVLDDFSRECLAIEVDT- 146

Query: 150 GIKSQDVQDLVITAVENRFGRINMLSEPIEWLTDNGSCFIAKDTASLLRDIGMEPCTTPV 209
                ++    +  V +R   +     P +   DNG   I+   A      G+       
Sbjct: 147 -----NLPAARVLRVLDRI--VAWRGLPAKLRMDNGPELISVLLADWAEKNGVALEFIQP 199

Query: 210 RSPQSNGMAEAFVKTFKRDYVAVNPTPDAETVMAQLPFWFEHYNNLHPHSALGYQSPREF 269
             P  N   E F KT++ + +          V      W   YN   PH +LG  +P EF
Sbjct: 200 GKPTQNSYIERFNKTYREEVLDFYLFKSLTEVKEITENWLRQYNEERPHESLGDLTPAEF 259

Query: 270 ISSQS 274
           +   S
Sbjct: 260 LLKNS 264