Pairwise Alignments

Query, 300 a.a., high-affinity branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 307 a.a., branched-chain amino acid ABC transporter permease from Bifidobacterium breve UCC2003

 Score =  220 bits (560), Expect = 4e-62
 Identities = 131/309 (42%), Positives = 187/309 (60%), Gaps = 20/309 (6%)

Query: 4   FVQQLVNGLTLGSIYGMIAIGYTMVYGIIGMINFAHGDIFMLGGFAALIVF--LLLTTFI 61
           FV QL NGL +GS+Y ++A+GYTMVYGII +INFAHGD  M+G +  ++    ++     
Sbjct: 7   FVSQLFNGLKIGSVYALVALGYTMVYGIIRLINFAHGDFIMVGAYVLMLTIPAIVAMGLP 66

Query: 62  AGVPVVLALLIMMVVGMLTAALWNWTIERVAYRPLRGSFR-LAPLITAIGMSIVLSNFIQ 120
           A V V+ A+L+ + VG++        +E+ AY+P+R     +  LITAI MS++L N  Q
Sbjct: 67  AWVAVIPAILVCVAVGVI--------VEKAAYKPVREKGNSMTALITAIAMSLLLENGSQ 118

Query: 121 VTQGPRNKPIPPLVSSVYDLFG-ISVSLKQIIIVVITAILLSVFWYIVNRTPLGRAQRAT 179
              G   + +P +       FG + +S   ++ +VI  +++      V  T  G+A RA 
Sbjct: 119 AIFGADFQTVPTIFHLPSIAFGKLKLSGDTLLTIVIGLVIMVGLQLFVKFTKQGKAMRAV 178

Query: 180 EQDRKMAALLGVDVDRTISVTFIMGAALAAVAGTMYLMYYGVVVFTDGFAPGVKAFTAAV 239
            +D++ A L+GV+V+ TI++TF +G+ LAAVA  MY   Y  V    G   G+KAF AAV
Sbjct: 179 SEDKEAAVLMGVNVNSTIALTFAIGSGLAAVASLMYCAAYPQVSPMMGAMLGLKAFVAAV 238

Query: 240 LGGIGSLPGAVLGGLLIGLIESLWSAY--------FTIDYKDVATFSILAIVLIFKPSGI 291
           LGGIGS+PGA++GGL IGLIESL  AY         T  + D   F+IL IVL+ KPSGI
Sbjct: 239 LGGIGSIPGAMIGGLAIGLIESLTKAYIGTVTGGLITSAFSDAIVFAILIIVLLVKPSGI 298

Query: 292 LGRPEVEKV 300
           +G+ E EKV
Sbjct: 299 MGKNEGEKV 307