Pairwise Alignments

Query, 235 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 262 a.a., DnaJ domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 61.2 bits (147), Expect = 2e-14
 Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 33/224 (14%)

Query: 31  GDPETRRKVAFSVAMIALSAKMAKADGIVNEAEV---SAFRDIFKFPADQAKNVARLYNL 87
           G  + R+ + F+    A+   +AKA G V E ++   +   D  +   D  K   + +  
Sbjct: 47  GQAKNRQGIFFNTTF-AVMGHVAKASGRVTETDIRIATLLMDQMRLTGDARKEAQQAFRE 105

Query: 88  ARQDVAGYEAYAEKMASLCSSCER-------NCPILEDIVDGLFHIAKSDGAVHEKELTF 140
            +          E    LCSS +           +++  ++     A SDG +   E   
Sbjct: 106 GK----------EPDFDLCSSLQAFRAVTQGRQELVQMFIEIQIQTALSDGELDAAEHAI 155

Query: 141 LRRVAEIFRMDDEHFGCIMAR-------HVHGDDR-----DPYQVLGVSPKDDFSAIRKR 188
           L  VA+      +    ++ R       H           D Y +LG++ +     +++ 
Sbjct: 156 LMTVAQELGYGRQQLDELLKRWQAEFRFHQTSSGNKTSITDAYHLLGITAEATDQEVKRA 215

Query: 189 YRVLVSENHPDMLVARGVPEEFHAIANDRMAVLNAAYEAIERER 232
           YR L++E+HPD LVA+G+P E   IAN +   + AAY+ ++ ER
Sbjct: 216 YRKLMNEHHPDKLVAKGLPPEMMEIANRKAQDIQAAYDRVKSER 259