Pairwise Alignments

Query, 712 a.a., polysaccharide transporter from Sinorhizobium meliloti 1021

Subject, 466 a.a., chain-length determining protein from Herbaspirillum seropedicae SmR1

 Score =  110 bits (274), Expect = 2e-28
 Identities = 97/446 (21%), Positives = 184/446 (41%), Gaps = 29/446 (6%)

Query: 18  FRAIWQRRVRVLLATVGAGAVAFGAAKMVAPD-YEGETRVLIESREPEFSGANQVSQNGS 76
           F  I +  ++++LA  G   VA     +V P  Y+  + V++  +  +      V+    
Sbjct: 6   FLLILRAHLKIILAIFGVTVVAALVVSLVLPKTYKATSSVVLNYKATDPVTGTMVTAQAL 65

Query: 77  DRMFDESGILSQVQVLRSADLIKQVARNMKLHELDEFDPSARPSAASDLLVMLGLKKNPL 136
                     +QV ++ S      V   +KL +    DP+ + S A+          + L
Sbjct: 66  PGYMP-----TQVDIINSRSTALAVVDALKLAQ----DPAVKESYANS--------NSQL 108

Query: 137 DLPPEERVLKEFEEKLQVYQVEKSRVIAIAFTSKDATLAAAIPNEMANVYLSLQSGAKLD 196
           D+     +       L       S VI I +  +D    A + N  A  Y  +    KLD
Sbjct: 109 DI--RNWLAGILLGNLDAQASRDSSVIDITYKGRDPQTVATMANAFAEAYQQVSMQLKLD 166

Query: 197 SNSEASRWLEPEIANLREKVREAEAKVALYRAESGLLPAGETQNFATRQLTDISTELARV 256
              +AS +   +I  LRE   +A+AK++ Y+ E G+       +    +L D+ST+L   
Sbjct: 167 PTRKASAYFNDQIKVLRENYEQAQAKLSKYQQEHGITNLDNRVDVENNRLNDLSTQLVAA 226

Query: 257 RSERANTAARAEGMRTALADGRPADTLADIVGSPMIQRLKENHANVQAQIADLSTALLDG 316
           +   A   +R +   +       A    D+  +P++Q LK N A  +A+ A  +  L   
Sbjct: 227 QGALAEAQSRRQAAGS-------AQNSPDVNANPLVQNLKANLAASEARFAQAAKRLGTQ 279

Query: 317 HPRLKGLKSQLEGIEGAIRSETRKILASLENEAKVGQLREQQLVQQMNTLKAQSAQAGEE 376
           HP     K++++G+   + +      AS+   A + Q RE ++  + N  K +  +    
Sbjct: 280 HPDYLNAKAEVDGLRAQLNAAIAATSASVATNASILQKREAEIRSEFNAQKQKVLELNRT 339

Query: 377 EVGLRALEREATAQRQLLETYLARYREATSRTVANATPADARVISRAVVPTSQSFPKVLP 436
              L  L R+  + ++  E    R+ +      +N   +D  +++ A+ PT+ S P++  
Sbjct: 340 RDELSVLSRDLDSAQRAYELTAQRFTQTNLEGQSN--QSDISILASAMPPTAPSSPRLFI 397

Query: 437 ITIVAAFASLLFSCVVIMLGELFSGR 462
             I++ F  L+   +  +  EL + R
Sbjct: 398 NLILSMFVGLVLGVMAALGLELINRR 423