Pairwise Alignments

Query, 271 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 300 a.a., ABC-type spermidine/putrescine transport system, permease component II from Pseudomonas stutzeri RCH2

 Score =  128 bits (321), Expect = 2e-34
 Identities = 80/253 (31%), Positives = 138/253 (54%), Gaps = 9/253 (3%)

Query: 20  GLAFMHLPILLIFLYAFTTEEKSYQFPPPGLTTQWFAVAWNRPDVWAALTLSVKVASIAT 79
           GL F++LP++++ +Y+F        +   G + +W+A   +   +  A+  S++VA+   
Sbjct: 14  GLLFIYLPMVILVIYSFNASRLVTVWG--GWSLKWYAGLLDNSQLMGAVMRSLEVAAYTA 71

Query: 80  AVALVLGTLCAAAVSQTRFF-GRETISLLVILPIALPGIITGIALRSAF-SMADI----- 132
             A+ LGT+ A  +++   F GR     LV  P+ +P +ITG++L   F +MA +     
Sbjct: 72  VAAVALGTMAAFVLTRIPVFRGRTLFGGLVTAPLVMPEVITGLSLLLLFVAMAQLVGWPA 131

Query: 133 PFSFWTIVLGHATFCIVVVYNNAVARFRRISGSLIEASMDLGADGFQTFRYVILPNIGTA 192
                TI + H TFC   V    +AR R +  S+ EA+MDLGA  ++ F  + +P I  +
Sbjct: 132 QRGLVTIWIAHTTFCSAYVAVVVMARLRELDLSIEEAAMDLGARPWKVFFLITMPMIAPS 191

Query: 193 LLAGGMLAFALSFDEVIVTTFTAGQQSTLPIWMLEELIRPRQRPVTNVVAMVVVMATFLP 252
           L AGGML+FALS D++++ +F +G  ST     +   +R   +P  N VA +++++  L 
Sbjct: 192 LAAGGMLSFALSLDDLVLASFVSGPGSTTLPMEIFSAVRLGVKPEINAVASLILLSVSLA 251

Query: 253 ILGAYYLTRDGDQ 265
              A+YLTR  ++
Sbjct: 252 TFLAWYLTRRAEK 264