Pairwise Alignments

Query, 543 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  355 bits (911), Expect = e-102
 Identities = 208/563 (36%), Positives = 318/563 (56%), Gaps = 48/563 (8%)

Query: 4   LLSVKNLKIEATSYPPGEPPKVVTLVEDVSFDLQKGKVLGLIGESGAGKSTIGLSALAYG 63
           LL VKNL+IE   YP      V   V+ ++ D+Q+G+++G++GESGAGKST+G + +   
Sbjct: 3   LLEVKNLRIE---YPSRHG--VHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLL 57

Query: 64  RGGCRITGGEVLLNGRDILKLGRGGINSVRGRHVCYVAQSAAAAFNPAHKLGDQVIEASL 123
                I GGEV LNG  I  L    +  VRG  + ++ Q    + NP   +  Q+ E   
Sbjct: 58  SPPGTIAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIH 117

Query: 124 RHGIMNRDEATKRALYLFRVLGLPNPETFGDRYPHQVSGGQLQRAMTAMALCPNPELIVF 183
            +  ++ +EA +RAL L + +G+P PE    +YPHQ SGG  QR + A+AL   P+LI+ 
Sbjct: 118 ANMQVSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIA 177

Query: 184 DEPTTALDVTTQIDVLAAIKHAIEETDTAALYITHDLAVVAQISDDIMVLRHGKTVEYGT 243
           DEPTTALDV+ Q  +L  I+   ++ +   + +THD+ VV+ ++D + V+  G  VE+G 
Sbjct: 178 DEPTTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGP 237

Query: 244 TKQVIEAPREEYTRALVS-----------------VRQAKRDEAPD-------------- 272
           T +V+  P   YTR+L+S                 + +AK  +  D              
Sbjct: 238 TAKVLGTPEHPYTRSLISAVPRSDRKLDRFPLVSYIEEAKELKPLDVKSHWLGQSQDHRK 297

Query: 273 QTDTLLKIEHVHAGYANGFKVL----------HDVSMHLPKGQTLAIVGESGSGKSTLAR 322
            T  LLK+E+V+  +     +           ++VS  + +G+T  +VGESGSGKST+AR
Sbjct: 298 YTGPLLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIAR 357

Query: 323 VITGLLPPSEGRITFEGKELPKALKGRTNDELRR-IQMIYQMADTAMNPRQTVREIVGRP 381
           VI GL  P+ GR+TFEG +L           LRR +QM++Q   T+MNPR  + +I+  P
Sbjct: 358 VIAGLYQPNAGRVTFEGIDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKIFDIIAEP 417

Query: 382 LSFYFGMHGAKKTER-VKELLDQIEMGTRFLDRYPAELSGGQKQRVAIARALAAKPELIL 440
           + F+       +T + V +LL+ + +G     +YP E SGGQ+QR++IARALA +P L++
Sbjct: 418 IRFHKLTRSESETRQIVNDLLEHVGLGKMAGLKYPHEFSGGQRQRISIARALATRPRLLI 477

Query: 441 CDEPTSALDPLVAEGILNLLLKLQEETAVSYVFITHDIAIVRAIADSVAVMHRGRLVRFG 500
           CDEPTSALD  V   ILNLL  LQ+E  ++ +FI+HD+ ++R + D V VM  G L+   
Sbjct: 478 CDEPTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTLLEVA 537

Query: 501 PKSKVLSPPFDDYTDLLLKSVPE 523
           P  ++ + P  +Y+  L+  +PE
Sbjct: 538 PTEQLFTDPQHEYSKKLISLMPE 560



 Score =  145 bits (367), Expect = 3e-39
 Identities = 89/261 (34%), Positives = 148/261 (56%), Gaps = 12/261 (4%)

Query: 276 TLLKIEHVHAGYANGFKV---LHDVSMHLPKGQTLAIVGESGSGKSTLARVITGLLPP-- 330
           +LL+++++   Y +   V   +  +++ + +G+ + +VGESG+GKST+   +  LL P  
Sbjct: 2   SLLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPPG 61

Query: 331 --SEGRITFEGKELPKALKGRTNDELR--RIQMIYQMADTAMNPRQTVREIVGRPLSFYF 386
             + G +   G+++   L  +   E+R  +I  I+Q   T++NP  TV   +   +    
Sbjct: 62  TIAGGEVYLNGEKI-SGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHANM 120

Query: 387 GMHGAKKTERVKELLDQ--IEMGTRFLDRYPAELSGGQKQRVAIARALAAKPELILCDEP 444
            +   +  +R   L+ Q  I      L +YP + SGG +QRV IA ALA +P+LI+ DEP
Sbjct: 121 QVSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADEP 180

Query: 445 TSALDPLVAEGILNLLLKLQEETAVSYVFITHDIAIVRAIADSVAVMHRGRLVRFGPKSK 504
           T+ALD  + + ILNL+ +L ++  V  + +THD+ +V  + D VAVM+RG LV FGP +K
Sbjct: 181 TTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTAK 240

Query: 505 VLSPPFDDYTDLLLKSVPEME 525
           VL  P   YT  L+ +VP  +
Sbjct: 241 VLGTPEHPYTRSLISAVPRSD 261