Pairwise Alignments

Query, 184 a.a., RNA polymerase sigma factor from Sinorhizobium meliloti 1021

Subject, 278 a.a., Sigma-24 (FecI) (NCBI) from Rhodospirillum rubrum S1H

 Score =  129 bits (325), Expect = 4e-35
 Identities = 65/153 (42%), Positives = 96/153 (62%)

Query: 8   FKREMLAALPSLRAFAMSLIGRHDRADDLVQDTIMKAWAKQDHFEIGTNMKAWLFTILRN 67
           F + ++ +LP +RAFA SL      ADDL Q+   +A A +D +  GTN +AW+FTI+RN
Sbjct: 95  FNKLLIDSLPHMRAFARSLTDDRALADDLAQEAATRALANRDSYHAGTNFRAWIFTIVRN 154

Query: 68  ELYSQMRKRGREVQDSDGHLTETLAHHPEQYGSLDLQDFRRALEQLPPDQREAIILVGAS 127
             YS+ R++ R ++  +            Q   L ++DF+R    L  +QREA++LVGA 
Sbjct: 155 CFYSEHRRKWRRMEKGNEDAMIRAGAPETQESGLRMEDFKRGFTLLSEEQREALVLVGAC 214

Query: 128 GFSYEEAATICGCALGTIKSRVNRARQRLQEIL 160
           GF Y++AA I GCA+GT+KSRV+RAR  L+ +L
Sbjct: 215 GFDYQQAAEIAGCAVGTMKSRVSRARAELRTML 247