Pairwise Alignments

Query, 436 a.a., sorbitol-binding periplasmic protein from Sinorhizobium meliloti 1021

Subject, 423 a.a., ABC transporter for D-sorbitol/xylitol, substrate-binding component (from data) from Herbaspirillum seropedicae SmR1

 Score =  138 bits (347), Expect = 4e-37
 Identities = 123/424 (29%), Positives = 193/424 (45%), Gaps = 27/424 (6%)

Query: 14  VALAGLAQAETLTIATVNNGDMIRMQKLTDDFTSKNPDIQLEWVTLEENVLRQRVTTDIA 73
           VA A       L +    +  +  M+K   D+  K    ++E     EN  R +   D A
Sbjct: 20  VASAQSCNVPVLKVLAQKSLGLTVMEKSLADY-QKRSGTRIEISYFGENDRRAKSRLDAA 78

Query: 74  TKGGQYDIMTIGTYEVPIWAKQGWLLPLDDLGP-EYDVDDLLPAIRSGLTIDGKLYAAPF 132
           TK G Y +  +    V  +A  GW++PL    P + D DD LP  R+  +     Y AP 
Sbjct: 79  TKAGSYQVYYVDEANVAEFASAGWIVPLLKYFPKDADYDDFLPGRRAVASYKDVAYFAPL 138

Query: 133 YGESSMVMYRKDLFEKAGLTMPDAPTWDFIADAARKITDKGNEIYGICLRGKAGWGENMA 192
            G S  + YR+DL EKAGL +P   T D +    +K+    + +YG   RG+ G G N+ 
Sbjct: 139 IGGSDFLFYRRDLLEKAGLPVPR--TLDELVADIKKLHSPPS-VYGWVARGQRGSGMNVW 195

Query: 193 FLTATANAFGARWFDENWKPQFDQPEWKNALDFYVKLMNDAGPPGASSNGFNENLSLFQT 252
                  A G +W D+N +P F+ P    A   Y  L   A PPGA++  ++  L  F++
Sbjct: 196 RWAPFMLAQGGQWTDKNNQPAFNSPAAVKATQLYADLFKYA-PPGAATYDWSNALEAFRS 254

Query: 253 GKCGMWIDATVAASFVTNPKESTVADKVGFALAPDTGLGKRGNWLWAWNLAIPAGSQKAE 312
           GK    I++T  A ++ +  +S+VADKVG+A  P        +  +   LAI A   K E
Sbjct: 255 GKVAFMIESTPFADWMEDSSKSSVADKVGYARPP----APLPSAAYGHGLAISAVGAKDE 310

Query: 313 ----SAQKFIAWATGKDYLKLVAEKEGWANVPPGTRTSLYENPEYQKAAPFAKMTLDSIN 368
               +A KFIA+ATGK+  +    ++ +++     R+S  ++  +QK      +    + 
Sbjct: 311 CTRQAAGKFIAFATGKEQEQARLREKVFSDY---NRSSTIQSDYFQK-----NVKPQILA 362

Query: 369 AADPKNPAVKPVPYVGVQFVAIPEFQGLGTAVGQVFSAALAGQMSVDQALASAQQLSTRE 428
                 P  K   +   Q+  I +   LG A+ +VF+     Q  + +AL  A Q +   
Sbjct: 363 GLKDTTPVSKLTIWPSPQWPDIGD--NLGVALEEVFTGT---QKDITRALDEAAQYAQDA 417

Query: 429 MTKA 432
           M  A
Sbjct: 418 MEHA 421