Pairwise Alignments

Query, 398 a.a., transporter from Sinorhizobium meliloti 1021

Subject, 377 a.a., RND family efflux transporter, MFP subunit from Pseudomonas stutzeri RCH2

 Score =  131 bits (329), Expect = 4e-35
 Identities = 93/315 (29%), Positives = 159/315 (50%), Gaps = 14/315 (4%)

Query: 82  AERAVVNDRLNAIGNGEAIRSVTVTPTATGNLTEILVKSGDRITEGQVIARLDSDDQMIA 141
           A R     RL AIG   A + + ++    G +T++  +SG+++++GQ I  LDS+ +  +
Sbjct: 48  ARRMDWQSRLPAIGTLRASQGIDLSVEIAGTITDVQFQSGEKVSKGQPIVLLDSEMERAS 107

Query: 142 AEQARLTRDSAREKVERYRNLSTARAVTAVEVRDSEIALQAAELALKTAELDLKRRDIVA 201
              A    + +R + +R R+L   +A++  E        Q AE ++      L ++ I+A
Sbjct: 108 LASAEADLNLSRVEFQRARSLLDRQAISRSEYDRLNAESQKAEASVAQLRASLAKKRILA 167

Query: 202 PSKGVVGIITVNIGDYVTTSTPIAVVDDRSQILVDFWVPERFAGKISVDQPVTASAIAQP 261
           P  G +GI  V++GDY+   TPIA + D S + VDF++ E+    +++ Q V     A P
Sbjct: 168 PFAGTIGIRQVDVGDYIAAGTPIATLQDLSTLYVDFFLAEQHVPLLALGQKVQLRVAAYP 227

Query: 262 GRALQGVVHAIDNRLDPESRTLRVRARLENPDDMLRAGMSFSVTVAFDGDRYPTVDP-LA 320
            +  +GV+ A++ +++  +R ++VRA L NPD  L  GM   + V    +    V P  A
Sbjct: 228 DQRFEGVITALNPKVETTTRNVQVRAELANPDGRLLPGMFADLQVLLPTETAQVVVPETA 287

Query: 321 IQWSSEGSFIWRV-KGDKSERV----PIKIIQR-------NPDKVLVDAE-LAEGDRVVT 367
           I ++  G+ +  V +G   E V    P  +++R         D V V  E L  G++V+T
Sbjct: 288 ITYTLYGNSVLLVTEGTPPEGVTTDEPYLVVERRFVTTGERRDGVTVILEGLEGGEQVIT 347

Query: 368 EGVQRLRDGGVVRIA 382
            G  +L  G  V IA
Sbjct: 348 AGQLKLDSGAHVAIA 362