Pairwise Alignments

Query, 398 a.a., transporter from Sinorhizobium meliloti 1021

Subject, 381 a.a., Secretion protein HlyD (NCBI) from Rhodospirillum rubrum S1H

 Score =  151 bits (381), Expect = 4e-41
 Identities = 102/331 (30%), Positives = 163/331 (49%), Gaps = 10/331 (3%)

Query: 77  VVVKPAERAVVNDRLNAIGNGEAIRSVTVTPTATGNLTEILVKSGDRITEGQVIARLDSD 136
           V V+ A      D + A+G   AI  VTV     G +  I  +SG R+ +G ++ RLD  
Sbjct: 45  VTVEDARAEDWQDTIPAVGTLRAINGVTVGAAVAGIVETISFESGQRVKKGDLLVRLDDG 104

Query: 137 DQMIAAEQARLTRDSAREKVERYRNLSTARAVTAVEVRDSEIALQAAELALKTAELDLKR 196
           ++    +  R   + +R    R R L  + A T   + D+E  L+     +   E  + +
Sbjct: 105 EERGELDAVRAQAELSRITAGRARRLVQSAAGTRANLDDAEAQLRVNLATIGQLEARVAK 164

Query: 197 RDIVAPSKGVVGIITVNIGDYVTTSTPIAVVDDRSQILVDFWVPERFAGKISVDQPVTAS 256
           + + AP  GV+G+  V++G+YVT    +  + D S IL DF V ++  G+++V   +T +
Sbjct: 165 KTVTAPFDGVLGVRAVDLGEYVTAGQTLVDLQDLSVILADFSVSQKDLGRVAVGAKLTLT 224

Query: 257 AIAQPGRALQGVVHAIDNRLDPESRTLRVRARLENPDDMLRAGMSFSVTV-AFDGDRYPT 315
             A PGRA +G + AI  ++D  +    V  R +NPD  LR GM   + V   +     T
Sbjct: 225 TDAWPGRAFEGTIKAIAPKVDANTGMAVVEGRFDNPDGALRPGMFAKLAVLRAERQSVVT 284

Query: 316 VDPLAIQWSSEGSFIWRVK--GD----KSERVPIKIIQRNPDKVLVDAELAEGDRVVTEG 369
           V   A+ +S  G  ++ +K  G+    + +R+ +    R  D+V+V A L+ G RVVT G
Sbjct: 285 VPATAVTYSLHGDALYVLKEAGEDGKVRVDRITVTTGVRRGDRVVVTAGLSAGQRVVTSG 344

Query: 370 VQRLRDGGVVRIAGEP---AAEAEQKVAGDA 397
             +L DG  V +A  P   AA AE    GD+
Sbjct: 345 QVKLNDGSAVAVAQAPLNTAARAESGAKGDS 375