Pairwise Alignments

Query, 398 a.a., transporter from Sinorhizobium meliloti 1021

Subject, 364 a.a., efflux transporter, RND family, MFP subunit from Marinobacter adhaerens HP15

 Score =  150 bits (379), Expect = 6e-41
 Identities = 97/348 (27%), Positives = 177/348 (50%), Gaps = 12/348 (3%)

Query: 50  GGEGARGGSGDSERGQGRRSGFAEAPLVVVKPAERAVVNDRLNAIGNGEAIRSVTVTPTA 109
           GG        D    Q  R   A A   ++   E   V D +NA+G+ +A+ +V +T   
Sbjct: 17  GGAFVYQNFDDGTAAQSGRERPASAVNTMLPQME--AVRDVVNAVGSLKALNAVELTTEV 74

Query: 110 TGNLTEILVKSGDRITEGQVIARLD-----SDDQMIAAEQARLTRDSAREKVERYRNLST 164
           +G + E+ +++G R+ +G V+ RLD     +D Q+I A+ A      AR ++ER + L +
Sbjct: 75  SGRVVELNLETGRRVGQGDVLLRLDDRQAWADLQVIEAQLA-----DARRQLERAQRLRS 129

Query: 165 ARAVTAVEVRDSEIALQAAELALKTAELDLKRRDIVAPSKGVVGIITVNIGDYVTTSTPI 224
             +++  +V     ++  AE   ++A++ L+   I AP  GVVG+  +++G Y+T  T +
Sbjct: 130 NNSISQSQVDQLRTSVDVAEAQRQSAQVRLENHRIEAPFAGVVGLSDISVGAYITAGTSV 189

Query: 225 AVVDDRSQILVDFWVPERFAGKISVDQPVTASAIAQPGRALQGVVHAIDNRLDPESRTLR 284
             +D   ++ + F +PERF G++S+ Q V  ++ A P +   G +  + +R+   SR+L 
Sbjct: 190 TTLDTTDRMELGFSIPERFLGQVSLGQEVRGASPAYPDQTFSGQLVELGSRVSELSRSLP 249

Query: 285 VRARLENPDDMLRAGMSFSVTVAFDGDRYPTVDPLAIQWSSEGSFIWRVKGDKSERVPIK 344
           VRA ++NPD +LR G   S T+     +   +   A+    +  +++  +   + RV + 
Sbjct: 250 VRALIDNPDGLLRPGQFMSATLTLRQRQALVIPEQAVMIRGDEQYVFVAEDGVARRVSVS 309

Query: 345 IIQRNPDKVLVDAELAEGDRVVTEGVQRLRDGGVVRIAGEPAAEAEQK 392
           +  R P  V V + L++ D V+  G  RL  G  VR+  +  A  E +
Sbjct: 310 LGSRMPGFVEVSSGLSQEDPVIVTGQDRLSSGDRVRVLEDDKAIPENR 357