Pairwise Alignments

Query, 789 a.a., exoribonuclease II protein from Sinorhizobium meliloti 1021

Subject, 842 a.a., ribonuclease R (NCBI) from Rhodospirillum rubrum S1H

 Score =  637 bits (1643), Expect = 0.0
 Identities = 360/742 (48%), Positives = 467/742 (62%), Gaps = 7/742 (0%)

Query: 37  HGVVPSREVLMRFIAENPQHASKREIAKAFGLKGEARVELKGLLRSLEEDGLVEKKR-KS 95
           H   PSRE ++ FI        +REIA+AF + G  R +L+ LL+ LE +G +++ R + 
Sbjct: 53  HVPFPSREQVLEFIRAANGEVDRREIARAFHITGPERADLRTLLKELESEGALQRGRGRR 112

Query: 96  LVRPGGLPPVTVLDITIRDVDGDLIGRPAEWLDDDGVAPAVLIKQSSVARAKGKTPVGGL 155
           +  PG LP V VL +   D +GDL  +P  W +D+     +L  +   AR  G     G+
Sbjct: 113 IAPPGSLPEVAVLIVARADAEGDLFCKPEHWPEDEEPPRILLWPEPHHARRPGVGAEIGV 172

Query: 156 GDRVLAKIFPAKERGGPAYTARIIKVLDKRKDAVLGVFRATPGGGGRLMPIDKRG-EELL 214
           GDR+LA++      G   Y AR I+ L      +LGV  A    G RL P ++R  +E L
Sbjct: 173 GDRILARL---TRIGDARYDARTIRRLAAAPSRLLGVL-ALARDGLRLRPTNRRDRDEYL 228

Query: 215 IDPEFIGDAKEGDLVEAHLSRIGRYGLPRAQVQNVVGSVASEKAISMIAIHAHGIPHVFP 274
           + PE  G A+ G+LVEA L    R GL RA+V   +G     ++IS++ +H+H IP  FP
Sbjct: 229 VAPEDAGGAEPGELVEAELLPSRRLGLRRAKVIERLGGREGPRSISLVVVHSHDIPVDFP 288

Query: 275 ERVLQEAEAARPATMAHREDWRTLPLITIDPADAKDHDDAVYAEPDSSPDNPGGVIVTVA 334
              L EAEAA    +  RED R +PL+TID  DA+D DDAV+AEPD  P NPGG    VA
Sbjct: 289 PEALAEAEAAVGVDLRGREDLRAVPLVTIDGEDARDFDDAVFAEPDDDPANPGGWRALVA 348

Query: 335 IADVSWYVRARSALDLEALKRGNSVYFPDRVVPMLPERISNDLCSLKEGVDRPALAVRMR 394
           IADV+ YVR  +ALD  A +RGNSVYFPDRVVPMLPE +SN  CSL+   DR  LAV M 
Sbjct: 349 IADVAHYVRIGAALDKAARERGNSVYFPDRVVPMLPEALSNGWCSLRPNEDRGCLAVWMI 408

Query: 395 FSKEGRKAGHTFHRIMMRSAAKLSYQQAQTAIDGAPDDKTGPILDTILKPLWEAYRTLTR 454
           F  EG K  H F R +MRSAA+L+Y Q Q A DG  DD T P+ + ++ PL+  ++ L  
Sbjct: 409 FDAEGNKLRHRFLRGLMRSAARLTYTQVQAARDGHADDLTAPLQERVIAPLYGVFQALLG 468

Query: 455 GRERRQPLELDVPERKIILKPDGTVDRVFVPERLDAHKLIEEMMIQANVAAAETLEQKRQ 514
            R RR  LELD+PERK++L   G V R+    R D+HKLIEE+MI ANV+AAETLE+KR+
Sbjct: 469 ARSRRGTLELDLPERKVVLDDGGEVARIEPRLRFDSHKLIEELMIAANVSAAETLEEKRR 528

Query: 515 VLIYRVHDQPSLAKQESLREFLATLDIALAKGGNMRANHFNGILAKADGKPYETIVNQMV 574
             +YRVHDQP+  K  +L EFL +LDI   KG   R+  FNG+L  A G P+E +VN++V
Sbjct: 529 PCMYRVHDQPAPDKLVALGEFLESLDIPFHKGSINRSGQFNGVLKAARGTPHEHMVNEVV 588

Query: 575 LRSQSQAIYSPENIGHFGLNLLRYAHFTSPIRRYADLIVHRALVSALGLGEGGIMPEEEA 634
           LRSQ+QA YSP+NIGHFGL L RYAHFTSPIRRYADL+VHRAL++ LGLG+ G+ P  E 
Sbjct: 589 LRSQAQAEYSPDNIGHFGLALRRYAHFTSPIRRYADLLVHRALIAGLGLGDDGLRPGAEE 648

Query: 635 ALDDIAAEISTFERRAMAAERDTIDRLIAHHLNGRVGEEFDGRVSGVTKAGLFVTLPAYG 694
              + AA I+  ERRA  AERD ++R     L  +VG  F GR++GVT+AGLFVTL   G
Sbjct: 649 DFVETAAHITATERRAAQAERDAVNRYTVSFLAAKVGATFAGRINGVTRAGLFVTLEDTG 708

Query: 695 ADGFIPISTLGRDYFIYDEAHQALSGEKSGLGYRLGDPVQVKLVEAVPLAGALRFEMLSE 754
           ADG IPI +L  DY+++D+AH  L G++ GL + LG PV+V L EA P++G L F +L  
Sbjct: 709 ADGLIPIGSLPNDYYVHDDAHHCLRGQRDGLEFHLGAPVEVLLREANPVSGGLVFGLLQG 768

Query: 755 GRKMPTAMRSFH-KAGRRDRTG 775
           G       R F  K   RD  G
Sbjct: 769 GVAGAAKGRGFSGKTKGRDGLG 790