Pairwise Alignments

Query, 398 a.a., tRNA-specific 2-thiouridylase MnmA from Sinorhizobium meliloti 1021

Subject, 371 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (RefSeq) from Shewanella loihica PV-4

 Score =  203 bits (517), Expect = 6e-57
 Identities = 130/382 (34%), Positives = 197/382 (51%), Gaps = 28/382 (7%)

Query: 10  PEDTRVVVAMSGGVDSSVVAGLLKREGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDAR 69
           P   +V+V MSGGVDSSV A LL ++GY V G+ ++ ++          C A +D+ DA+
Sbjct: 8   PNGKKVIVGMSGGVDSSVSAYLLMQQGYQVEGLFMKNWEEDDTDEY---CAAAEDLKDAQ 64

Query: 70  RVCETIGIPHYVLDYEARFRETVINPFAESYIAGETPIPCVACNQTVKFADLLATAKE-L 128
            VC+ +GI  + +++ A + + V   F   Y AG TP P + CN+ +KF   L  A + L
Sbjct: 65  AVCDKLGIKLHTVNFAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLEFADDIL 124

Query: 129 GADALATGHYIRSRPSPKPRYAGQRALYRPADAERDQSYFLFATTQEQIDYLRFPLGGLP 188
            AD +A GHY+R   +     +GQ  + R  D  +DQSYFL+  + EQI    FP+G L 
Sbjct: 125 DADYIAMGHYVRRSDA-----SGQSQMLRGVDGNKDQSYFLYTLSHEQIARSLFPVGELE 179

Query: 189 KSETRALAEEMGLVVAKKADSQDICFVPQGKYSDIVSKLKPNAALAGEIVHLDGRVLGAH 248
           KSE R +A+EMGLV   K DS  ICF+ + K++D +    P  A  G+I   +G V+G H
Sbjct: 180 KSEVREIAKEMGLVTHDKKDSTGICFIGERKFTDFLRTFLP--AQPGKIETAEGEVIGEH 237

Query: 249 EGILHYTIGQRRGIGV-----ATGEPLYVVYLDSRSRRVIV---GPKEALETRRVYLRDV 300
           +G++++T+GQR+G+G+     +  +P YVV  D     ++V   G    L +   Y   +
Sbjct: 238 QGLMYHTLGQRKGLGIGGMKNSNDDPWYVVDKDLERNVLVVGQGGKHPRLMSVGFYADQL 297

Query: 301 NWLGDEELEAAAGQGFECFAKVRSTRRPAPAVLKSDAEG-LYVELVEGEAGVAPGQACAL 359
           +W+           G +   K R  ++     L  + +  + V   E  A V PGQ+   
Sbjct: 298 HWVD----RTGPNDGAKITVKTRYRQQDVACTLTYEGDDRIKVIFDEPVAAVTPGQSAVF 353

Query: 360 YSGTGEDARVYGGGFIRRSERE 381
           Y G        GGG I    RE
Sbjct: 354 YDG----EVCLGGGIIDSLIRE 371