Pairwise Alignments

Query, 383 a.a., ribonuclease D protein from Sinorhizobium meliloti 1021

Subject, 374 a.a., ribonuclease D from Pseudomonas stutzeri RCH2

 Score =  202 bits (513), Expect = 2e-56
 Identities = 115/357 (32%), Positives = 202/357 (56%), Gaps = 9/357 (2%)

Query: 12  CRELARSSYITIDTEFLRETTFWPVLCLIQMASPEMAVIVDPMAPGIDLAPFFALMSNPD 71
           C E  +  Y+ +DTEF+R  TF+P+  L+Q+     A ++DP+A   D + F A++ +  
Sbjct: 18  CAEWRQLPYVAVDTEFMRVDTFYPIAGLVQVGDGRRAYLIDPLAVH-DWSAFAAVLQDNA 76

Query: 72  VVKVFHAARQDIEIIHHLGNLIPHPIFDTQVAAMVCGFGDSVSYDQLVNRIKNEQIDKSS 131
           VVKV HA  +D+E++  L   +P P+FDTQ+AA     G S+ Y +LV  +   ++ K  
Sbjct: 77  VVKVLHACSEDLEVLLRLTGSLPQPLFDTQLAAGYLNIGFSMGYSRLVQAVLGIELPKGE 136

Query: 132 RFTDWSRRPLTDKQLDYALADVTHLRDIYQYLTKELDREGRSSWLAEEMAILESRETYDL 191
             +DW +RPL+D Q+ YA  D  HL ++Y+ L  +L  E + +W+ E+ A L +    + 
Sbjct: 137 TRSDWLQRPLSDMQVQYAAEDAQHLAELYEALLPKLS-EDKRAWVLEDGAELVANLQRES 195

Query: 192 HPDNAWQRLKMRVK-KPIELAVLQKVAAWREREARARNVPRGRIIKDDAIYEIAQQQPKD 250
            P+ A++ +K   + KP +LAVL+ + AWRER+ARARN PR R++++ +++ +A+ QP+D
Sbjct: 196 DPEEAYREVKQAWRLKPQQLAVLKVLTAWRERQARARNQPRNRVLREASLWPLARTQPRD 255

Query: 251 AEALGRLRTIPKGWERSSAGTALIEAVGEALAIPRGELPRLPRQNHAPEGAAAASELLKV 310
              L R+  +     R   G AL++ +G+A A P  + P  P     P   ++  + L+ 
Sbjct: 256 LVTLARIEDMHPRTVRQD-GEALLQMIGQAAATPEQDWP-APLPEPLPLEVSSVLKKLRA 313

Query: 311 LLKLISEKEGVAAKIIANSDDLDRIAAEG--EGADVA--ALKGWRRELFGMTALKLI 363
           + +  ++   +A +++     L+ +   G  +G      +L+GWRRE  G   L+++
Sbjct: 314 VGQHEAKVLDIAPELMLRKKTLEALLKSGYPDGPYQLPDSLRGWRRERMGQALLEVL 370