Pairwise Alignments

Query, 383 a.a., ribonuclease D protein from Sinorhizobium meliloti 1021

Subject, 206 a.a., 3'-5' exonuclease (NCBI) from Rhodospirillum rubrum S1H

 Score = 73.2 bits (178), Expect = 6e-18
 Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 1/172 (0%)

Query: 21  ITIDTEFLRETTFWPVLCLIQMASPEMAVIVDPMAPGIDLAPFFALMSNPDVVKVFHAAR 80
           I +DTE +        LC++Q++  +    V  +   +      +L+ +P V+K+ H  R
Sbjct: 24  IAVDTETMGLNPHRDRLCVVQLSGGDNIAHVVHLNRDLQAPVLASLLGDPSVLKIMHFGR 83

Query: 81  QDIEIIHHLGNLIPHPIFDTQVAAMVCGFG-DSVSYDQLVNRIKNEQIDKSSRFTDWSRR 139
            DI  IHH   ++  P++ T++A+ +C    DS     L   +    + K  + +DW   
Sbjct: 84  FDIASIHHGLGVLCEPVYCTKIASKLCRTNTDSHGLKALCKDLLGVDLSKHQQTSDWGAE 143

Query: 140 PLTDKQLDYALADVTHLRDIYQYLTKELDREGRSSWLAEEMAILESRETYDL 191
            L+ +QL YA +DV +L  +   L   L REGR++        L +R   DL
Sbjct: 144 SLSPEQLTYAASDVLYLHALKARLDGLLAREGRTTLAEGCFRFLPTRALLDL 195