Pairwise Alignments

Query, 383 a.a., ribonuclease D protein from Sinorhizobium meliloti 1021

Subject, 385 a.a., ribonuclease D from Marinobacter adhaerens HP15

 Score =  148 bits (374), Expect = 2e-40
 Identities = 96/336 (28%), Positives = 166/336 (49%), Gaps = 7/336 (2%)

Query: 21  ITIDTEFLRETTFWPVLCLIQMASPEMAVIVDPMAPGIDLAPFFALMSNPDVVKVFHAAR 80
           + +DTEF R  TF+P+  L+Q+       +VDP         F  ++++PD  K+ +A  
Sbjct: 41  LALDTEFERVNTFYPIPGLVQLGLDGEFCLVDPSVAE-QSGRFREVLADPDTPKLLYAMS 99

Query: 81  QDIEIIHHLGNLIPHPIFDTQVAAMVCGFGDSVSYDQLVNRIKNEQIDKSSRFTDWSRRP 140
           +D+E+     NL P  + D Q+ A + G G S+ Y +LV  +  E +DKS+  +DW  RP
Sbjct: 100 EDLELFRQWLNLQPAGVIDLQIGAAMAGAGFSLGYARLVETLFGETLDKSATRSDWLARP 159

Query: 141 LTDKQLDYALADVTHLRDIYQYLTKELDREGRSSWLAEEMAILESRETYDLHPDNAWQRL 200
           L+D Q  YA+ D+  L  +Y +++  L   G  + L EE A   +       PDN + +L
Sbjct: 160 LSDAQQRYAIDDIRFLEPMYHWVSALLRDRGLEAALVEESARFANELAGQEDPDNHYLKL 219

Query: 201 KMR-VKKPIELAVLQKVAAWREREARARNVPRGRIIKDDAIYEIAQQQPKDAEALGRLRT 259
           +        +  VL+++  WRERE + R+ PR R++ D  +  IA++ P   + L  ++ 
Sbjct: 220 RAGWTLSAQQQGVLKELVRWRERECQRRDRPRNRVLADALLIAIAERLPASVKELSNIQG 279

Query: 260 IPKGWERSSAGTALIEAVGEALAIPRGELPRL-PRQNHAPEGAAAASELLKVLLKLISEK 318
           +P G  R   G  LIE V          L R+ P  +   +G     + LK L +  +E 
Sbjct: 280 VPSGAVR-RYGDTLIELVSRGSTADNSSLERIAPPLSRDQQG---FFKQLKRLFRNAAED 335

Query: 319 EGVAAKIIANSDDLDRIAAEGEGADVAALKGWRREL 354
             +  +++A    L+++  + + A     +GWR ++
Sbjct: 336 ADIPMELLAPRKRLEKVVQQPDLAQHDFFQGWRAQI 371