Pairwise Alignments

Query, 487 a.a., DNA repair protein RadA from Sinorhizobium meliloti 1021

Subject, 456 a.a., DNA repair protein RadA (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  362 bits (929), Expect = e-104
 Identities = 201/468 (42%), Positives = 278/468 (59%), Gaps = 14/468 (2%)

Query: 21  MAKARTQFVCQNCGTVHSRWVGKCDGCGEWNTIIEDNPTAGIGGGPMR--TPKKGRPVAL 78
           MAK R  +VC  CG    +W G+C  C  WNT+           G  R   P   RP  L
Sbjct: 1   MAKVRETYVCSACGANTPQWRGQCPTCKAWNTLDAVTVARETRSGVRRQGAPDSVRPRPL 60

Query: 79  TTLSGEIEDAPRIQTGISELDRVTGGGFVRGSALLVGGDPGIGKSTVLMQAAAALARRKH 138
             +S E        TG+  LDRV G G V G+A+L GG+PGIGKST+L+Q A A+A    
Sbjct: 61  RDVSDE--GGSPFGTGLEALDRVLGSGLVPGAAILFGGEPGIGKSTLLLQVAGAVAASGR 118

Query: 139 RVIYVSGEEAIAQVRLRAQRLGAADSDVLLAAETNVEDILATLSEGKRPDLVIIDSIQTL 198
            V+Y+SGEE++ Q++ RA+RLG     +L  A + VED+ + L  G  P L+++DS+QTL
Sbjct: 119 DVLYLSGEESLTQLKGRAERLGVLHERLLAVATSRVEDVFSVLESGTPPALLVLDSVQTL 178

Query: 199 WSDIVDSAPGTVTQVRTGVQAMIRFAKQTGTAVVLVGHVTKEGQIAGPRVVEHMVDAVLY 258
            SD+ +  PG V+QVR     ++   K+ GTAV+LVGHVTK+G +AGPR++EHMVD V+ 
Sbjct: 179 TSDLAEGLPGNVSQVRAVATEVVDRCKRAGTAVLLVGHVTKDGNLAGPRLLEHMVDTVVS 238

Query: 259 FEGDRGHHYRILRTVKNRFGPTDEIGVFEMSDKGLREVANPSELFLGERNAKSPGAAVFA 318
            EGDR   +R+LR +KNRFGP  E+ VF+M+ +GL  V +PS  FLG R+    G AV  
Sbjct: 239 LEGDRRQMFRLLRVLKNRFGPNQELLVFQMAQRGLEVVEDPSTFFLGARDPALSGTAVVM 298

Query: 319 GMEGTRPVLVEVQALVAPTSLGTPRRAVVGWDSARLSMILAVLEAHCGIRLGQHDVYLNV 378
            ++G RP  VEVQALV  + L  PRR  +G+D  RL ++LAVLE    +  GQ D+Y  +
Sbjct: 299 AVDGQRPFAVEVQALVTRSYLAIPRRTGLGFDVNRLHLLLAVLEKRLRLNFGQVDIYAKI 358

Query: 379 AGGYRISEPAADLAVASALVSSLAGLALPPDCVYFGEVSLSGAVRPVAHTAQRLKEAEKL 438
            GG R+ +P  DLA+ +A++SS   +ALP   V +GEV L+G VRPVA    RL +A +L
Sbjct: 359 GGGMRLQDPGMDLALVAAVLSSFYDVALPERAVLWGEVDLNGQVRPVAAHDIRLGQAARL 418

Query: 439 GFSQAVLPSASTELPKNGNGRWSEMESLPDLVARIAGSRRALQQTNDE 486
           G+   + P         G GR   + ++ +L AR+ G   A +    E
Sbjct: 419 GYGPVLHP---------GEGR-GAVPTVVELQARLFGKSGAPRHNPSE 456