Pairwise Alignments

Query, 599 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 594 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) (NCBI) from Rhodospirillum rubrum S1H

 Score =  327 bits (837), Expect = 1e-93
 Identities = 202/578 (34%), Positives = 300/578 (51%), Gaps = 18/578 (3%)

Query: 19  IVTLAKLVIENALQPIVEATTGAVFGYESLMRGFERLGFASPVELLDKAEAAGQLLALEH 78
           +  L+ L  + AL P++   +G V GY+++         A P     + +      A+E 
Sbjct: 8   VADLSSLGRDVALDPVISLRSGRVIGYQAV---------AGPPPGGREEDDLLLREAIEA 58

Query: 79  LINSRAVAAFATLPDFSARTLFLNFDARLIGGEGDIVERLVSHLKRANIAPSSLCFELSE 138
            + S A+A FA +     + LFL  D  L+    D+  RL   L    +    +   LSE
Sbjct: 59  AVWSSAIALFAAVSAGRDQRLFLGLDFGLVVRWPDMAARLAMLLDAHGVDRRVITLSLSE 118

Query: 139 RFD---------SSKMPDFPVLVRQLRLAGFKLAIDDFGAGFSGLKLLCDQPVDYVKIDR 189
           R              +      V Q+R A   +A+D FG G +GL LL     DYV +D 
Sbjct: 119 RRSILDLGGGSGERALDRVAGAVVQMRGAVGSIALDGFGGGHAGLALLAAVKPDYVVLDP 178

Query: 190 HFVSEIDKDARKRHLVRHTVNMAHALGTRVIAEGVETEAEFLVCRDLGCDLMQGYFIARP 249
           +FVS    D  +R  + H V++AH LG +VIA  VE  A++  CRD GCDL++G  +A+P
Sbjct: 179 YFVSTQAIDQTRRLFLGHLVDVAHLLGAQVIAPQVEHLADYHACRDAGCDLVRGPVLAKP 238

Query: 250 TTHIMELQAVYPHLEPTSGTRRPSSTLDSILIRKEIEQLPAVRESDDLDSVFHLFRLNPR 309
                 L  VYP +   + T +     D  L+  +++++  +  S  +  VF  FR    
Sbjct: 239 DRDPRRLPEVYPQVAALNATSQRRGRGDQHLVAAQMDEIDPLMISTKMADVFERFRRQKD 298

Query: 310 QAFFPVLNANGEPRGILHEYHVKEMIYHPFGRDLLKNRLYQRRISHFVTPAPIADLDTPA 369
           + FFPV++  GEP GI+ E  +KE  Y  +G+DL+ N+   R +S F+T  P  D+DT A
Sbjct: 299 RTFFPVVDERGEPLGIVREVDLKEYTYSLYGKDLIGNKALGRTLSAFLTRCPRVDIDTRA 358

Query: 370 DEMLKIFAGMDGSDCVMLTENMRYAGILSASSLLKIINEKQLKMAQEQNPLTGLPGNRAI 429
           +++L+ F+    SD +++T++ RY G L+A+SLL++IN+K L++A++QNPLT LPGN  I
Sbjct: 359 EKILEAFSTTPSSDGLIITQDGRYRGFLTAASLLRVINDKNLEVARDQNPLTRLPGNTVI 418

Query: 430 RDYVQNAILDGDQARYFCYCDFDDFKPFNDTYGFQKGDLAITLFAALLRRHFIGEEKFLG 489
              +   + D  Q     Y DFD FKPFND YGF++GD AI LFA LLR        F+G
Sbjct: 419 NTELGEILADDRQGASLVYLDFDHFKPFNDKYGFRQGDRAILLFADLLRSQLAEAGFFIG 478

Query: 490 HVGGDDFFIGIDGCTEEDIRGVLSRLIDDFRSDVRQLYSPEHLSAGRISGYGRDGLTKAF 549
           HVGGDDFF  +       +   +  LID F +DV   Y  E   AG +    RDG+ +  
Sbjct: 479 HVGGDDFFAALREGVPAAVTARIRALIDKFAADVTAFYDDETRQAGCVLARDRDGIERRL 538

Query: 550 PLMRCSIAVLVLPEGLVLSDGQTVSKRIAEIKARAKAS 587
           PL+  S A++ L  G  + D   +   IA +K  AK S
Sbjct: 539 PLLSVSAALVHLAPGHAIGDLDRIGGVIARLKKAAKQS 576