Pairwise Alignments

Query, 391 a.a., RepA2 replication protein from Sinorhizobium meliloti 1021

Subject, 260 a.a., hypothetical protein from Xanthomonas campestris pv. campestris strain 8004

 Score = 92.0 bits (227), Expect = 2e-23
 Identities = 83/273 (30%), Positives = 127/273 (46%), Gaps = 25/273 (9%)

Query: 110 QIVAVTNFKGGSSKTSTTIHLGHYLALKGYRVLAVDLDPQASLTALHGSLPEFDYRGGDT 169
           +I A+ N KGG  KT+TT+ LG  LA  G+RVL +DLDP +SLT   G   +   RG   
Sbjct: 2   RIWAIANQKGGVGKTTTTLALGRGLAALGHRVLLIDLDPHSSLTRAFGVAVDPPPRGVLD 61

Query: 170 LFSAIRFDDPVPTKSIIHKTHIVGFDVICAGLELTEFETAVALEMRRSAG-TGFLLRVSQ 228
           LF       P    S+ H++ I G   +CA       + A+A   RRSA   G  L +  
Sbjct: 62  LFGT----PPSDLASLAHESAIPGLSYVCA-------QAALATLERRSANQPGLGLALQN 110

Query: 229 ALEQVADDYDFVLMDSAPSLNFLTLSSLTAATGVIIPVPAHMLDVDSTAKFLELAGSYMQ 288
           A+ + A  +D++L+D  P+L  L +++L A   V++P  A  L +   A  +  A     
Sbjct: 111 AMARHAGQHDYILLDCPPTLGLLMINALAACDRVVVPTQAEPLALHGLASMVRTA----- 165

Query: 289 ILNEVGTAAQWDF-AKFLITKFEPNDHPQANMSALMRQVFGEDLLLNSVIKSTAV--ADA 345
             + V  + + D     L T F+            M+  +G  +  ++V   T +  A A
Sbjct: 166 --DMVQRSRRRDLPVSILPTLFDRRTRAGNETLKEMQTTYGPVVWEDAVPMDTRICNAAA 223

Query: 346 LTWKQSLYEVQRSRFSAPKTYDRAIESINAANA 378
           LT   +  + Q    SA   Y RA+E + A +A
Sbjct: 224 LTVPATTTDYQGRGLSA---YRRALEWVLADDA 253